Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNOT4O95628 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.4■□□□□ 0.7
CNOT4O95628 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNOT4O95628 DUSP8P3-201ENST00000399571 1760 ntBASIC19.39■□□□□ 0.7
CNOT4O95628 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CNOT4O95628 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CNOT4O95628 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.39■□□□□ 0.69
CNOT4O95628 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CNOT4O95628 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.39■□□□□ 0.69
CNOT4O95628 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CNOT4O95628 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CNOT4O95628 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CNOT4O95628 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.39■□□□□ 0.69
CNOT4O95628 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
CNOT4O95628 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.39■□□□□ 0.69
CNOT4O95628 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CNOT4O95628 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CNOT4O95628 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CNOT4O95628 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
CNOT4O95628 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CNOT4O95628 IRS3P-201ENST00000223076 1006 ntBASIC19.38■□□□□ 0.69
CNOT4O95628 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CNOT4O95628 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CNOT4O95628 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.38■□□□□ 0.69
CNOT4O95628 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
CNOT4O95628 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CNOT4O95628 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CNOT4O95628 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CNOT4O95628 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.38■□□□□ 0.69
CNOT4O95628 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CNOT4O95628 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CNOT4O95628 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CNOT4O95628 AC010525.1-201ENST00000585559 441 ntBASIC19.38■□□□□ 0.69
CNOT4O95628 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CNOT4O95628 AC087623.3-201ENST00000607047 1098 ntBASIC19.38■□□□□ 0.69
CNOT4O95628 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CNOT4O95628 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CNOT4O95628 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CNOT4O95628 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.37■□□□□ 0.69
CNOT4O95628 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CNOT4O95628 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
CNOT4O95628 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CNOT4O95628 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CNOT4O95628 AL162430.1-201ENST00000480705 870 ntBASIC19.37■□□□□ 0.69
CNOT4O95628 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.37■□□□□ 0.69
CNOT4O95628 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.37■□□□□ 0.69
CNOT4O95628 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CNOT4O95628 AC087239.1-201ENST00000622671 572 ntBASIC19.37■□□□□ 0.69
CNOT4O95628 AL031602.1-201ENST00000633169 911 ntBASIC19.37■□□□□ 0.69
CNOT4O95628 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.37■□□□□ 0.69
CNOT4O95628 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CNOT4O95628 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CNOT4O95628 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.37■□□□□ 0.69
CNOT4O95628 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.37■□□□□ 0.69
CNOT4O95628 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.37■□□□□ 0.69
CNOT4O95628 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.36■□□□□ 0.69
CNOT4O95628 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CNOT4O95628 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CNOT4O95628 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CNOT4O95628 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CNOT4O95628 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
CNOT4O95628 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CNOT4O95628 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.36■□□□□ 0.69
CNOT4O95628 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CNOT4O95628 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CNOT4O95628 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CNOT4O95628 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CNOT4O95628 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CNOT4O95628 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
CNOT4O95628 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CNOT4O95628 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.35■□□□□ 0.69
CNOT4O95628 TSPY26P-201ENST00000476365 1326 ntBASIC19.35■□□□□ 0.69
CNOT4O95628 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
CNOT4O95628 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.35■□□□□ 0.69
CNOT4O95628 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.35■□□□□ 0.69
CNOT4O95628 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.35■□□□□ 0.69
CNOT4O95628 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CNOT4O95628 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CNOT4O95628 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CNOT4O95628 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.35■□□□□ 0.69
CNOT4O95628 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CNOT4O95628 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.35■□□□□ 0.69
CNOT4O95628 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CNOT4O95628 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CNOT4O95628 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CNOT4O95628 MIR572-201ENST00000384983 95 ntBASIC19.34■□□□□ 0.69
CNOT4O95628 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.34■□□□□ 0.69
CNOT4O95628 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.34■□□□□ 0.69
CNOT4O95628 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CNOT4O95628 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
CNOT4O95628 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CNOT4O95628 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
CNOT4O95628 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
CNOT4O95628 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
CNOT4O95628 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CNOT4O95628 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CNOT4O95628 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CNOT4O95628 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
CNOT4O95628 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CNOT4O95628 AC012676.1-201ENST00000574705 1949 ntBASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms