Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SNX4O95219 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
SNX4O95219 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SNX4O95219 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SNX4O95219 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SNX4O95219 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SNX4O95219 AC024257.2-201ENST00000549699 147 ntBASIC20.44■□□□□ 0.86
SNX4O95219 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SNX4O95219 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SNX4O95219 LINC01529-204ENST00000636474 1715 ntBASIC20.44■□□□□ 0.86
SNX4O95219 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SNX4O95219 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SNX4O95219 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
SNX4O95219 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
SNX4O95219 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SNX4O95219 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SNX4O95219 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SNX4O95219 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.43■□□□□ 0.86
SNX4O95219 AC006455.2-201ENST00000429931 906 ntBASIC20.43■□□□□ 0.86
SNX4O95219 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.43■□□□□ 0.86
SNX4O95219 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.43■□□□□ 0.86
SNX4O95219 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.43■□□□□ 0.86
SNX4O95219 DUX4L4-201ENST00000566884 1269 ntBASIC20.43■□□□□ 0.86
SNX4O95219 MIR3181-201ENST00000578512 73 ntBASIC20.43■□□□□ 0.86
SNX4O95219 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SNX4O95219 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SNX4O95219 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
SNX4O95219 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.43■□□□□ 0.86
SNX4O95219 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SNX4O95219 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.43■□□□□ 0.86
SNX4O95219 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.43■□□□□ 0.86
SNX4O95219 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SNX4O95219 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
SNX4O95219 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SNX4O95219 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SNX4O95219 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.42■□□□□ 0.86
SNX4O95219 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNX4O95219 AC007375.3-201ENST00000600936 2314 ntBASIC20.42■□□□□ 0.86
SNX4O95219 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNX4O95219 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNX4O95219 EDA-201ENST00000338901 1233 ntBASIC20.42■□□□□ 0.86
SNX4O95219 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.42■□□□□ 0.86
SNX4O95219 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SNX4O95219 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SNX4O95219 AC005837.3-201ENST00000612163 286 ntBASIC20.42■□□□□ 0.86
SNX4O95219 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
SNX4O95219 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
SNX4O95219 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
SNX4O95219 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
SNX4O95219 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.41■□□□□ 0.86
SNX4O95219 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.41■□□□□ 0.86
SNX4O95219 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
SNX4O95219 SLC25A24-204ENST00000569674 2357 ntBASIC20.41■□□□□ 0.86
SNX4O95219 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNX4O95219 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.41■□□□□ 0.86
SNX4O95219 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.41■□□□□ 0.86
SNX4O95219 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.41■□□□□ 0.86
SNX4O95219 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SNX4O95219 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SNX4O95219 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.4■□□□□ 0.86
SNX4O95219 ECEL1P1-201ENST00000373592 1742 ntBASIC20.4■□□□□ 0.86
SNX4O95219 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.4■□□□□ 0.86
SNX4O95219 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SNX4O95219 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.4■□□□□ 0.86
SNX4O95219 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.4■□□□□ 0.86
SNX4O95219 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SNX4O95219 pRNA.6-201ENST00000610482 90 ntBASIC20.4■□□□□ 0.86
SNX4O95219 pRNA.5-201ENST00000612139 90 ntBASIC20.4■□□□□ 0.86
SNX4O95219 pRNA.11-201ENST00000618423 90 ntBASIC20.4■□□□□ 0.86
SNX4O95219 pRNA.13-201ENST00000619112 90 ntBASIC20.4■□□□□ 0.86
SNX4O95219 AL355001.2-201ENST00000620617 1191 ntBASIC20.4■□□□□ 0.86
SNX4O95219 AC136469.2-201ENST00000623944 1028 ntBASIC20.4■□□□□ 0.86
SNX4O95219 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SNX4O95219 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.86
SNX4O95219 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
SNX4O95219 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SNX4O95219 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.39■□□□□ 0.85
SNX4O95219 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.39■□□□□ 0.85
SNX4O95219 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.85
SNX4O95219 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.39■□□□□ 0.85
SNX4O95219 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SNX4O95219 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
SNX4O95219 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SNX4O95219 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
SNX4O95219 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SNX4O95219 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.39■□□□□ 0.85
SNX4O95219 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
SNX4O95219 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SNX4O95219 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.39■□□□□ 0.85
SNX4O95219 DUSP8P3-201ENST00000399571 1760 ntBASIC20.39■□□□□ 0.85
SNX4O95219 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
SNX4O95219 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SNX4O95219 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SNX4O95219 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
SNX4O95219 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SNX4O95219 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SNX4O95219 AC019069.1-201ENST00000610008 1333 ntBASIC20.38■□□□□ 0.85
SNX4O95219 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SNX4O95219 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.38■□□□□ 0.85
SNX4O95219 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms