Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CPNE3O75131 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.95■□□□□ 0.94
CPNE3O75131 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.95■□□□□ 0.94
CPNE3O75131 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.95■□□□□ 0.94
CPNE3O75131 AC123595.1-201ENST00000440769 1046 ntBASIC20.95■□□□□ 0.94
CPNE3O75131 MIR6084-201ENST00000622012 110 ntBASIC20.95■□□□□ 0.94
CPNE3O75131 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CPNE3O75131 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CPNE3O75131 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CPNE3O75131 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CPNE3O75131 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CPNE3O75131 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.94■□□□□ 0.94
CPNE3O75131 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CPNE3O75131 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CPNE3O75131 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CPNE3O75131 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CPNE3O75131 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CPNE3O75131 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
CPNE3O75131 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.93■□□□□ 0.94
CPNE3O75131 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.93■□□□□ 0.94
CPNE3O75131 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.93■□□□□ 0.94
CPNE3O75131 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CPNE3O75131 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CPNE3O75131 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.93■□□□□ 0.94
CPNE3O75131 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
CPNE3O75131 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.93■□□□□ 0.94
CPNE3O75131 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.92■□□□□ 0.94
CPNE3O75131 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CPNE3O75131 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CPNE3O75131 ABCB10P4-201ENST00000566803 2184 ntBASIC20.92■□□□□ 0.94
CPNE3O75131 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CPNE3O75131 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CPNE3O75131 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
CPNE3O75131 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CPNE3O75131 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.92■□□□□ 0.94
CPNE3O75131 AL031602.1-201ENST00000633169 911 ntBASIC20.92■□□□□ 0.94
CPNE3O75131 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CPNE3O75131 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CPNE3O75131 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CPNE3O75131 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
CPNE3O75131 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CPNE3O75131 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.91■□□□□ 0.94
CPNE3O75131 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.91■□□□□ 0.94
CPNE3O75131 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CPNE3O75131 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CPNE3O75131 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CPNE3O75131 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CPNE3O75131 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.91■□□□□ 0.94
CPNE3O75131 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.91■□□□□ 0.94
CPNE3O75131 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CPNE3O75131 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CPNE3O75131 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.91■□□□□ 0.94
CPNE3O75131 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.91■□□□□ 0.94
CPNE3O75131 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.91■□□□□ 0.94
CPNE3O75131 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CPNE3O75131 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CPNE3O75131 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CPNE3O75131 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.9■□□□□ 0.94
CPNE3O75131 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CPNE3O75131 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.9■□□□□ 0.94
CPNE3O75131 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
CPNE3O75131 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CPNE3O75131 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.9■□□□□ 0.94
CPNE3O75131 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.9■□□□□ 0.94
CPNE3O75131 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CPNE3O75131 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
CPNE3O75131 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CPNE3O75131 AL353803.4-201ENST00000565882 1934 ntBASIC20.9■□□□□ 0.94
CPNE3O75131 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CPNE3O75131 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CPNE3O75131 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CPNE3O75131 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CPNE3O75131 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CPNE3O75131 AC004687.1-201ENST00000579003 1625 ntBASIC20.89■□□□□ 0.94
CPNE3O75131 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CPNE3O75131 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
CPNE3O75131 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
CPNE3O75131 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CPNE3O75131 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.89■□□□□ 0.93
CPNE3O75131 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.89■□□□□ 0.93
CPNE3O75131 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CPNE3O75131 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.89■□□□□ 0.93
CPNE3O75131 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CPNE3O75131 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CPNE3O75131 AC105233.4-201ENST00000642045 216 ntBASIC20.89■□□□□ 0.93
CPNE3O75131 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CPNE3O75131 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
CPNE3O75131 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CPNE3O75131 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CPNE3O75131 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.88■□□□□ 0.93
CPNE3O75131 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.88■□□□□ 0.93
CPNE3O75131 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CPNE3O75131 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CPNE3O75131 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CPNE3O75131 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.88■□□□□ 0.93
CPNE3O75131 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.88■□□□□ 0.93
CPNE3O75131 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CPNE3O75131 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CPNE3O75131 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CPNE3O75131 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms