Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 AC073648.6-201ENST00000641589 218 ntBASIC21.67■■□□□ 1.06
GFRA3O60609 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
GFRA3O60609 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
GFRA3O60609 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
GFRA3O60609 KRT87P-202ENST00000534226 1464 ntBASIC21.66■■□□□ 1.06
GFRA3O60609 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
GFRA3O60609 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
GFRA3O60609 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
GFRA3O60609 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
GFRA3O60609 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GFRA3O60609 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GFRA3O60609 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
GFRA3O60609 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.65■■□□□ 1.06
GFRA3O60609 AC097658.1-201ENST00000475555 843 ntBASIC21.65■■□□□ 1.06
GFRA3O60609 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC21.65■■□□□ 1.06
GFRA3O60609 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
GFRA3O60609 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
GFRA3O60609 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GFRA3O60609 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GFRA3O60609 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
GFRA3O60609 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
GFRA3O60609 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
GFRA3O60609 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
GFRA3O60609 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
GFRA3O60609 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
GFRA3O60609 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
GFRA3O60609 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.64■■□□□ 1.05
GFRA3O60609 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.64■■□□□ 1.05
GFRA3O60609 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.64■■□□□ 1.05
GFRA3O60609 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC21.64■■□□□ 1.05
GFRA3O60609 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
GFRA3O60609 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
GFRA3O60609 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
GFRA3O60609 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
GFRA3O60609 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.63■■□□□ 1.05
GFRA3O60609 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
GFRA3O60609 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
GFRA3O60609 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.63■■□□□ 1.05
GFRA3O60609 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
GFRA3O60609 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
GFRA3O60609 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
GFRA3O60609 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC21.63■■□□□ 1.05
GFRA3O60609 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.63■■□□□ 1.05
GFRA3O60609 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC21.63■■□□□ 1.05
GFRA3O60609 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
GFRA3O60609 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.63■■□□□ 1.05
GFRA3O60609 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
GFRA3O60609 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
GFRA3O60609 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
GFRA3O60609 AC010536.3-201ENST00000620306 533 ntBASIC21.63■■□□□ 1.05
GFRA3O60609 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.63■■□□□ 1.05
GFRA3O60609 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
GFRA3O60609 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
GFRA3O60609 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
GFRA3O60609 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.62■■□□□ 1.05
GFRA3O60609 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
GFRA3O60609 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
GFRA3O60609 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.62■■□□□ 1.05
GFRA3O60609 AC026366.1-201ENST00000488803 879 ntBASIC21.62■■□□□ 1.05
GFRA3O60609 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.62■■□□□ 1.05
GFRA3O60609 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC21.62■■□□□ 1.05
GFRA3O60609 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
GFRA3O60609 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
GFRA3O60609 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
GFRA3O60609 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.61■■□□□ 1.05
GFRA3O60609 AL359736.2-201ENST00000621992 437 ntBASIC21.61■■□□□ 1.05
GFRA3O60609 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.61■■□□□ 1.05
GFRA3O60609 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
GFRA3O60609 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
GFRA3O60609 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.6■■□□□ 1.05
GFRA3O60609 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
GFRA3O60609 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
GFRA3O60609 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
GFRA3O60609 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
GFRA3O60609 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.6■■□□□ 1.05
GFRA3O60609 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
GFRA3O60609 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC21.6■■□□□ 1.05
GFRA3O60609 CYP2T1P-201ENST00000432607 1285 ntBASIC21.6■■□□□ 1.05
GFRA3O60609 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
GFRA3O60609 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
GFRA3O60609 SNORA78-201ENST00000459373 127 ntBASIC21.6■■□□□ 1.05
GFRA3O60609 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
GFRA3O60609 WDR88-203ENST00000592765 651 ntTSL 5 BASIC21.6■■□□□ 1.05
GFRA3O60609 AP001160.3-201ENST00000601484 763 ntBASIC21.6■■□□□ 1.05
GFRA3O60609 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
GFRA3O60609 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
GFRA3O60609 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC21.59■■□□□ 1.05
GFRA3O60609 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
GFRA3O60609 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.59■■□□□ 1.05
GFRA3O60609 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
GFRA3O60609 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
GFRA3O60609 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.59■■□□□ 1.05
GFRA3O60609 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
GFRA3O60609 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
GFRA3O60609 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.59■■□□□ 1.05
GFRA3O60609 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC21.59■■□□□ 1.05
GFRA3O60609 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
GFRA3O60609 AL445228.2-201ENST00000605589 952 ntBASIC21.59■■□□□ 1.05
GFRA3O60609 MYC-209ENST00000641252 345 ntBASIC21.59■■□□□ 1.05
GFRA3O60609 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms