Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.62■□□□□ 0.73
CXCL13O43927 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.62■□□□□ 0.73
CXCL13O43927 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CXCL13O43927 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CXCL13O43927 LINC01960-201ENST00000563759 1884 ntBASIC19.62■□□□□ 0.73
CXCL13O43927 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
CXCL13O43927 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.62■□□□□ 0.73
CXCL13O43927 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.61■□□□□ 0.73
CXCL13O43927 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CXCL13O43927 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.61■□□□□ 0.73
CXCL13O43927 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CXCL13O43927 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CXCL13O43927 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.61■□□□□ 0.73
CXCL13O43927 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.61■□□□□ 0.73
CXCL13O43927 IRS3P-201ENST00000223076 1006 ntBASIC19.61■□□□□ 0.73
CXCL13O43927 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.61■□□□□ 0.73
CXCL13O43927 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.61■□□□□ 0.73
CXCL13O43927 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.61■□□□□ 0.73
CXCL13O43927 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.61■□□□□ 0.73
CXCL13O43927 AC087239.1-201ENST00000622671 572 ntBASIC19.61■□□□□ 0.73
CXCL13O43927 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CXCL13O43927 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CXCL13O43927 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.61■□□□□ 0.73
CXCL13O43927 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.61■□□□□ 0.73
CXCL13O43927 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
CXCL13O43927 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.6■□□□□ 0.73
CXCL13O43927 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CXCL13O43927 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
CXCL13O43927 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.6■□□□□ 0.73
CXCL13O43927 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.6■□□□□ 0.73
CXCL13O43927 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CXCL13O43927 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.6■□□□□ 0.73
CXCL13O43927 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CXCL13O43927 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CXCL13O43927 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CXCL13O43927 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CXCL13O43927 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.6■□□□□ 0.73
CXCL13O43927 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.6■□□□□ 0.73
CXCL13O43927 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.6■□□□□ 0.73
CXCL13O43927 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CXCL13O43927 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CXCL13O43927 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CXCL13O43927 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CXCL13O43927 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CXCL13O43927 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.6■□□□□ 0.73
CXCL13O43927 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.6■□□□□ 0.73
CXCL13O43927 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CXCL13O43927 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CXCL13O43927 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CXCL13O43927 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.59■□□□□ 0.73
CXCL13O43927 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CXCL13O43927 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.59■□□□□ 0.73
CXCL13O43927 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CXCL13O43927 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CXCL13O43927 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.59■□□□□ 0.73
CXCL13O43927 AC010141.3-201ENST00000456659 717 ntBASIC19.59■□□□□ 0.73
CXCL13O43927 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.59■□□□□ 0.73
CXCL13O43927 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CXCL13O43927 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CXCL13O43927 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CXCL13O43927 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CXCL13O43927 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CXCL13O43927 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CXCL13O43927 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.59■□□□□ 0.73
CXCL13O43927 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
CXCL13O43927 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CXCL13O43927 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CXCL13O43927 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CXCL13O43927 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.58■□□□□ 0.72
CXCL13O43927 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CXCL13O43927 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.58■□□□□ 0.72
CXCL13O43927 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.58■□□□□ 0.72
CXCL13O43927 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CXCL13O43927 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
CXCL13O43927 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.58■□□□□ 0.72
CXCL13O43927 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CXCL13O43927 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CXCL13O43927 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.58■□□□□ 0.72
CXCL13O43927 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CXCL13O43927 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.58■□□□□ 0.72
CXCL13O43927 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CXCL13O43927 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.57■□□□□ 0.72
CXCL13O43927 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
CXCL13O43927 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CXCL13O43927 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.57■□□□□ 0.72
CXCL13O43927 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CXCL13O43927 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.57■□□□□ 0.72
CXCL13O43927 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CXCL13O43927 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
CXCL13O43927 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CXCL13O43927 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CXCL13O43927 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
CXCL13O43927 MIR572-201ENST00000384983 95 ntBASIC19.56■□□□□ 0.72
CXCL13O43927 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CXCL13O43927 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.56■□□□□ 0.72
CXCL13O43927 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.56■□□□□ 0.72
CXCL13O43927 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CXCL13O43927 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
CXCL13O43927 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CXCL13O43927 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms