Protein–RNA interactions for Protein: O43638

FOXS1, Forkhead box protein S1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXS1O43638 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
FOXS1O43638 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
FOXS1O43638 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.72■□□□□ 0.91
FOXS1O43638 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
FOXS1O43638 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
FOXS1O43638 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FOXS1O43638 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
FOXS1O43638 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FOXS1O43638 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.72■□□□□ 0.91
FOXS1O43638 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
FOXS1O43638 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.72■□□□□ 0.91
FOXS1O43638 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.72■□□□□ 0.91
FOXS1O43638 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
FOXS1O43638 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
FOXS1O43638 LINC01960-201ENST00000563759 1884 ntBASIC20.71■□□□□ 0.91
FOXS1O43638 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
FOXS1O43638 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.71■□□□□ 0.91
FOXS1O43638 AC010141.3-201ENST00000456659 717 ntBASIC20.71■□□□□ 0.91
FOXS1O43638 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
FOXS1O43638 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
FOXS1O43638 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.91
FOXS1O43638 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
FOXS1O43638 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
FOXS1O43638 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.7■□□□□ 0.9
FOXS1O43638 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.7■□□□□ 0.9
FOXS1O43638 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FOXS1O43638 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FOXS1O43638 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.7■□□□□ 0.9
FOXS1O43638 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.7■□□□□ 0.9
FOXS1O43638 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.7■□□□□ 0.9
FOXS1O43638 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
FOXS1O43638 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
FOXS1O43638 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.7■□□□□ 0.9
FOXS1O43638 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.69■□□□□ 0.9
FOXS1O43638 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.69■□□□□ 0.9
FOXS1O43638 C9orf163-202ENST00000624034 2573 ntBASIC20.69■□□□□ 0.9
FOXS1O43638 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
FOXS1O43638 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
FOXS1O43638 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FOXS1O43638 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FOXS1O43638 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
FOXS1O43638 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.69■□□□□ 0.9
FOXS1O43638 AC087239.1-201ENST00000622671 572 ntBASIC20.69■□□□□ 0.9
FOXS1O43638 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.69■□□□□ 0.9
FOXS1O43638 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FOXS1O43638 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.69■□□□□ 0.9
FOXS1O43638 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
FOXS1O43638 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
FOXS1O43638 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FOXS1O43638 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.68■□□□□ 0.9
FOXS1O43638 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.68■□□□□ 0.9
FOXS1O43638 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.68■□□□□ 0.9
FOXS1O43638 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
FOXS1O43638 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.68■□□□□ 0.9
FOXS1O43638 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
FOXS1O43638 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FOXS1O43638 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FOXS1O43638 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FOXS1O43638 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FOXS1O43638 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.68■□□□□ 0.9
FOXS1O43638 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXS1O43638 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.67■□□□□ 0.9
FOXS1O43638 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXS1O43638 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.67■□□□□ 0.9
FOXS1O43638 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.67■□□□□ 0.9
FOXS1O43638 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.67■□□□□ 0.9
FOXS1O43638 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXS1O43638 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.67■□□□□ 0.9
FOXS1O43638 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXS1O43638 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.67■□□□□ 0.9
FOXS1O43638 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXS1O43638 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
FOXS1O43638 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXS1O43638 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.66■□□□□ 0.9
FOXS1O43638 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.66■□□□□ 0.9
FOXS1O43638 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXS1O43638 AC026271.2-201ENST00000428091 497 ntBASIC20.66■□□□□ 0.9
FOXS1O43638 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.66■□□□□ 0.9
FOXS1O43638 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
FOXS1O43638 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.66■□□□□ 0.9
FOXS1O43638 RARRES2P6-201ENST00000567333 442 ntBASIC20.66■□□□□ 0.9
FOXS1O43638 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.66■□□□□ 0.9
FOXS1O43638 OXCT2P1-201ENST00000447263 1535 ntBASIC20.66■□□□□ 0.9
FOXS1O43638 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXS1O43638 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXS1O43638 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
FOXS1O43638 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.65■□□□□ 0.9
FOXS1O43638 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FOXS1O43638 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
FOXS1O43638 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FOXS1O43638 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
FOXS1O43638 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FOXS1O43638 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
FOXS1O43638 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.65■□□□□ 0.9
FOXS1O43638 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
FOXS1O43638 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
FOXS1O43638 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.65■□□□□ 0.9
FOXS1O43638 AC012414.1-201ENST00000556676 535 ntBASIC20.65■□□□□ 0.9
FOXS1O43638 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.65■□□□□ 0.9
FOXS1O43638 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms