Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
AP3D1O14617 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
AP3D1O14617 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.38■□□□□ 0.85
AP3D1O14617 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
AP3D1O14617 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
AP3D1O14617 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.38■□□□□ 0.85
AP3D1O14617 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
AP3D1O14617 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.38■□□□□ 0.85
AP3D1O14617 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.38■□□□□ 0.85
AP3D1O14617 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
AP3D1O14617 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
AP3D1O14617 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
AP3D1O14617 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
AP3D1O14617 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
AP3D1O14617 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
AP3D1O14617 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
AP3D1O14617 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.37■□□□□ 0.85
AP3D1O14617 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.37■□□□□ 0.85
AP3D1O14617 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.37■□□□□ 0.85
AP3D1O14617 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.37■□□□□ 0.85
AP3D1O14617 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
AP3D1O14617 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.37■□□□□ 0.85
AP3D1O14617 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
AP3D1O14617 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
AP3D1O14617 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
AP3D1O14617 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.37■□□□□ 0.85
AP3D1O14617 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
AP3D1O14617 AC007375.3-201ENST00000600936 2314 ntBASIC20.37■□□□□ 0.85
AP3D1O14617 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.37■□□□□ 0.85
AP3D1O14617 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
AP3D1O14617 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
AP3D1O14617 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
AP3D1O14617 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.36■□□□□ 0.85
AP3D1O14617 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
AP3D1O14617 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.36■□□□□ 0.85
AP3D1O14617 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.36■□□□□ 0.85
AP3D1O14617 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.36■□□□□ 0.85
AP3D1O14617 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
AP3D1O14617 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
AP3D1O14617 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
AP3D1O14617 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
AP3D1O14617 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
AP3D1O14617 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
AP3D1O14617 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
AP3D1O14617 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.35■□□□□ 0.85
AP3D1O14617 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.35■□□□□ 0.85
AP3D1O14617 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.35■□□□□ 0.85
AP3D1O14617 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
AP3D1O14617 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
AP3D1O14617 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
AP3D1O14617 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.34■□□□□ 0.85
AP3D1O14617 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.34■□□□□ 0.85
AP3D1O14617 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.34■□□□□ 0.85
AP3D1O14617 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.34■□□□□ 0.85
AP3D1O14617 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
AP3D1O14617 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
AP3D1O14617 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.34■□□□□ 0.85
AP3D1O14617 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
AP3D1O14617 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.34■□□□□ 0.85
AP3D1O14617 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
AP3D1O14617 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
AP3D1O14617 C17orf82-201ENST00000623772 1530 ntBASIC20.33■□□□□ 0.85
AP3D1O14617 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
AP3D1O14617 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
AP3D1O14617 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
AP3D1O14617 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
AP3D1O14617 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.33■□□□□ 0.85
AP3D1O14617 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
AP3D1O14617 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
AP3D1O14617 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
AP3D1O14617 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
AP3D1O14617 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
AP3D1O14617 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
AP3D1O14617 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.33■□□□□ 0.84
AP3D1O14617 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
AP3D1O14617 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
AP3D1O14617 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
AP3D1O14617 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
AP3D1O14617 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
AP3D1O14617 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
AP3D1O14617 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.32■□□□□ 0.84
AP3D1O14617 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
AP3D1O14617 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
AP3D1O14617 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
AP3D1O14617 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
AP3D1O14617 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
AP3D1O14617 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
AP3D1O14617 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.32■□□□□ 0.84
AP3D1O14617 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
AP3D1O14617 AC009086.3-201ENST00000623486 1008 ntBASIC20.32■□□□□ 0.84
AP3D1O14617 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
AP3D1O14617 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
AP3D1O14617 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
AP3D1O14617 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
AP3D1O14617 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.31■□□□□ 0.84
AP3D1O14617 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.31■□□□□ 0.84
AP3D1O14617 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
AP3D1O14617 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
AP3D1O14617 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
AP3D1O14617 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms