Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SOX1O00570 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
SOX1O00570 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SOX1O00570 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SOX1O00570 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SOX1O00570 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SOX1O00570 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC23.71■■□□□ 1.39
SOX1O00570 GAS7-202ENST00000396115 929 ntTSL 5 BASIC23.71■■□□□ 1.39
SOX1O00570 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
SOX1O00570 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SOX1O00570 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
SOX1O00570 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
SOX1O00570 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
SOX1O00570 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
SOX1O00570 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
SOX1O00570 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC23.7■■□□□ 1.38
SOX1O00570 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC23.7■■□□□ 1.38
SOX1O00570 MIR4497-201ENST00000583208 89 ntBASIC23.7■■□□□ 1.38
SOX1O00570 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC23.7■■□□□ 1.38
SOX1O00570 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC23.7■■□□□ 1.38
SOX1O00570 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SOX1O00570 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
SOX1O00570 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SOX1O00570 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
SOX1O00570 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SOX1O00570 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC23.69■■□□□ 1.38
SOX1O00570 LINC01023-201ENST00000606054 436 ntBASIC23.69■■□□□ 1.38
SOX1O00570 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SOX1O00570 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
SOX1O00570 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC23.69■■□□□ 1.38
SOX1O00570 CD37-213ENST00000598095 1598 ntTSL 2 BASIC23.69■■□□□ 1.38
SOX1O00570 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC23.68■■□□□ 1.38
SOX1O00570 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SOX1O00570 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SOX1O00570 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SOX1O00570 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SOX1O00570 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
SOX1O00570 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC23.68■■□□□ 1.38
SOX1O00570 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SOX1O00570 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC23.67■■□□□ 1.38
SOX1O00570 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC23.67■■□□□ 1.38
SOX1O00570 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SOX1O00570 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
SOX1O00570 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
SOX1O00570 AC073648.6-201ENST00000641589 218 ntBASIC23.67■■□□□ 1.38
SOX1O00570 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SOX1O00570 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SOX1O00570 ALDH1A3-203ENST00000557963 1670 ntBASIC23.67■■□□□ 1.38
SOX1O00570 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
SOX1O00570 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC23.66■■□□□ 1.38
SOX1O00570 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
SOX1O00570 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC23.66■■□□□ 1.38
SOX1O00570 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SOX1O00570 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC23.66■■□□□ 1.38
SOX1O00570 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC23.66■■□□□ 1.38
SOX1O00570 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC23.66■■□□□ 1.38
SOX1O00570 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC23.66■■□□□ 1.38
SOX1O00570 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC23.66■■□□□ 1.38
SOX1O00570 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.66■■□□□ 1.38
SOX1O00570 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
SOX1O00570 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SOX1O00570 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC23.65■■□□□ 1.38
SOX1O00570 KRT87P-202ENST00000534226 1464 ntBASIC23.65■■□□□ 1.38
SOX1O00570 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SOX1O00570 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SOX1O00570 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SOX1O00570 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
SOX1O00570 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC23.65■■□□□ 1.38
SOX1O00570 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC23.65■■□□□ 1.38
SOX1O00570 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SOX1O00570 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SOX1O00570 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC23.65■■□□□ 1.38
SOX1O00570 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC23.65■■□□□ 1.38
SOX1O00570 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SOX1O00570 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC23.65■■□□□ 1.38
SOX1O00570 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC23.65■■□□□ 1.38
SOX1O00570 MYC-209ENST00000641252 345 ntBASIC23.65■■□□□ 1.38
SOX1O00570 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC23.64■■□□□ 1.38
SOX1O00570 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC23.64■■□□□ 1.38
SOX1O00570 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
SOX1O00570 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.64■■□□□ 1.38
SOX1O00570 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.38
SOX1O00570 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SOX1O00570 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
SOX1O00570 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
SOX1O00570 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
SOX1O00570 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC23.64■■□□□ 1.37
SOX1O00570 UBE2SP1-201ENST00000450587 669 ntBASIC23.64■■□□□ 1.37
SOX1O00570 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
SOX1O00570 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SOX1O00570 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
SOX1O00570 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC23.63■■□□□ 1.37
SOX1O00570 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
SOX1O00570 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
SOX1O00570 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SOX1O00570 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC23.63■■□□□ 1.37
SOX1O00570 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
SOX1O00570 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SOX1O00570 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SOX1O00570 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms