Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CLIC1O00299 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLIC1O00299 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CLIC1O00299 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.65■□□□□ 0.9
CLIC1O00299 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CLIC1O00299 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLIC1O00299 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.64■□□□□ 0.9
CLIC1O00299 AC004687.1-201ENST00000579003 1625 ntBASIC20.64■□□□□ 0.9
CLIC1O00299 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CLIC1O00299 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CLIC1O00299 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLIC1O00299 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLIC1O00299 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CLIC1O00299 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.64■□□□□ 0.89
CLIC1O00299 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLIC1O00299 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLIC1O00299 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
CLIC1O00299 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CLIC1O00299 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLIC1O00299 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CLIC1O00299 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CLIC1O00299 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.63■□□□□ 0.89
CLIC1O00299 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CLIC1O00299 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CLIC1O00299 Z92544.1-202ENST00000571933 1220 ntBASIC20.63■□□□□ 0.89
CLIC1O00299 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.63■□□□□ 0.89
CLIC1O00299 MTDHP2-201ENST00000601468 714 ntBASIC20.63■□□□□ 0.89
CLIC1O00299 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.63■□□□□ 0.89
CLIC1O00299 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CLIC1O00299 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.63■□□□□ 0.89
CLIC1O00299 AL137060.1-201ENST00000618151 2648 ntBASIC20.63■□□□□ 0.89
CLIC1O00299 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
CLIC1O00299 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CLIC1O00299 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
CLIC1O00299 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.62■□□□□ 0.89
CLIC1O00299 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLIC1O00299 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CLIC1O00299 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLIC1O00299 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.62■□□□□ 0.89
CLIC1O00299 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLIC1O00299 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CLIC1O00299 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
CLIC1O00299 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.62■□□□□ 0.89
CLIC1O00299 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.62■□□□□ 0.89
CLIC1O00299 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLIC1O00299 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLIC1O00299 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLIC1O00299 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CLIC1O00299 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CLIC1O00299 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.61■□□□□ 0.89
CLIC1O00299 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLIC1O00299 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.61■□□□□ 0.89
CLIC1O00299 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.61■□□□□ 0.89
CLIC1O00299 MIR4787-201ENST00000607364 84 ntBASIC20.61■□□□□ 0.89
CLIC1O00299 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLIC1O00299 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CLIC1O00299 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CLIC1O00299 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CLIC1O00299 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.6■□□□□ 0.89
CLIC1O00299 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLIC1O00299 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLIC1O00299 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CLIC1O00299 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CLIC1O00299 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLIC1O00299 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLIC1O00299 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CLIC1O00299 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CLIC1O00299 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLIC1O00299 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.59■□□□□ 0.89
CLIC1O00299 C17orf82-201ENST00000623772 1530 ntBASIC20.59■□□□□ 0.89
CLIC1O00299 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLIC1O00299 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLIC1O00299 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CLIC1O00299 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLIC1O00299 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLIC1O00299 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.59■□□□□ 0.89
CLIC1O00299 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.59■□□□□ 0.89
CLIC1O00299 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLIC1O00299 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.59■□□□□ 0.89
CLIC1O00299 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.59■□□□□ 0.89
CLIC1O00299 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLIC1O00299 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.58■□□□□ 0.89
CLIC1O00299 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CLIC1O00299 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.58■□□□□ 0.89
CLIC1O00299 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLIC1O00299 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLIC1O00299 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
CLIC1O00299 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.89
CLIC1O00299 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLIC1O00299 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.58■□□□□ 0.89
CLIC1O00299 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLIC1O00299 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.58■□□□□ 0.89
CLIC1O00299 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.58■□□□□ 0.89
CLIC1O00299 CA15P2-201ENST00000611168 834 ntBASIC20.58■□□□□ 0.89
CLIC1O00299 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
CLIC1O00299 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CLIC1O00299 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CLIC1O00299 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CLIC1O00299 AC010542.4-201ENST00000563151 1910 ntBASIC20.58■□□□□ 0.88
CLIC1O00299 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms