Protein–RNA interactions for Protein: A6H8M9

CDHR4, Cadherin-related family member 4, humanhuman

Predictions only

Length 788 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4A6H8M9 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDHR4A6H8M9 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDHR4A6H8M9 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CDHR4A6H8M9 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CDHR4A6H8M9 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDHR4A6H8M9 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
CDHR4A6H8M9 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CDHR4A6H8M9 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CDHR4A6H8M9 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDHR4A6H8M9 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDHR4A6H8M9 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.14■□□□□ 0.81
CDHR4A6H8M9 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.14■□□□□ 0.81
CDHR4A6H8M9 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.14■□□□□ 0.81
CDHR4A6H8M9 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
CDHR4A6H8M9 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDHR4A6H8M9 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDHR4A6H8M9 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
CDHR4A6H8M9 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDHR4A6H8M9 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDHR4A6H8M9 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CDHR4A6H8M9 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDHR4A6H8M9 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDHR4A6H8M9 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
CDHR4A6H8M9 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDHR4A6H8M9 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDHR4A6H8M9 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDHR4A6H8M9 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDHR4A6H8M9 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDHR4A6H8M9 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.13■□□□□ 0.81
CDHR4A6H8M9 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
CDHR4A6H8M9 AC137767.1-201ENST00000602918 1920 ntBASIC20.13■□□□□ 0.81
CDHR4A6H8M9 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.13■□□□□ 0.81
CDHR4A6H8M9 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
CDHR4A6H8M9 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
CDHR4A6H8M9 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDHR4A6H8M9 AC133637.1-201ENST00000624115 1537 ntBASIC20.12■□□□□ 0.81
CDHR4A6H8M9 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDHR4A6H8M9 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CDHR4A6H8M9 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDHR4A6H8M9 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CDHR4A6H8M9 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.12■□□□□ 0.81
CDHR4A6H8M9 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDHR4A6H8M9 SRD5A1P1-201ENST00000442297 786 ntBASIC20.12■□□□□ 0.81
CDHR4A6H8M9 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.12■□□□□ 0.81
CDHR4A6H8M9 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.12■□□□□ 0.81
CDHR4A6H8M9 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.12■□□□□ 0.81
CDHR4A6H8M9 pRNA.6-201ENST00000610482 90 ntBASIC20.12■□□□□ 0.81
CDHR4A6H8M9 CA15P2-201ENST00000611168 834 ntBASIC20.12■□□□□ 0.81
CDHR4A6H8M9 pRNA.5-201ENST00000612139 90 ntBASIC20.12■□□□□ 0.81
CDHR4A6H8M9 pRNA.11-201ENST00000618423 90 ntBASIC20.12■□□□□ 0.81
CDHR4A6H8M9 pRNA.13-201ENST00000619112 90 ntBASIC20.12■□□□□ 0.81
CDHR4A6H8M9 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.12■□□□□ 0.81
CDHR4A6H8M9 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CDHR4A6H8M9 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.12■□□□□ 0.81
CDHR4A6H8M9 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.11■□□□□ 0.81
CDHR4A6H8M9 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CDHR4A6H8M9 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDHR4A6H8M9 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDHR4A6H8M9 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
CDHR4A6H8M9 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDHR4A6H8M9 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDHR4A6H8M9 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDHR4A6H8M9 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CDHR4A6H8M9 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.11■□□□□ 0.81
CDHR4A6H8M9 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.11■□□□□ 0.81
CDHR4A6H8M9 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDHR4A6H8M9 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.11■□□□□ 0.81
CDHR4A6H8M9 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.11■□□□□ 0.81
CDHR4A6H8M9 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDHR4A6H8M9 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CDHR4A6H8M9 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDHR4A6H8M9 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDHR4A6H8M9 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDHR4A6H8M9 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.1■□□□□ 0.81
CDHR4A6H8M9 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
CDHR4A6H8M9 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CDHR4A6H8M9 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.1■□□□□ 0.81
CDHR4A6H8M9 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CDHR4A6H8M9 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.1■□□□□ 0.81
CDHR4A6H8M9 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CDHR4A6H8M9 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.1■□□□□ 0.81
CDHR4A6H8M9 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDHR4A6H8M9 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.1■□□□□ 0.81
CDHR4A6H8M9 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.1■□□□□ 0.81
CDHR4A6H8M9 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.1■□□□□ 0.81
CDHR4A6H8M9 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDHR4A6H8M9 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
CDHR4A6H8M9 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.1■□□□□ 0.81
CDHR4A6H8M9 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDHR4A6H8M9 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CDHR4A6H8M9 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDHR4A6H8M9 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDHR4A6H8M9 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.09■□□□□ 0.81
CDHR4A6H8M9 MIR3181-201ENST00000578512 73 ntBASIC20.09■□□□□ 0.81
CDHR4A6H8M9 AC092171.4-201ENST00000609130 632 ntBASIC20.09■□□□□ 0.81
CDHR4A6H8M9 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.09■□□□□ 0.81
CDHR4A6H8M9 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDHR4A6H8M9 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDHR4A6H8M9 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDHR4A6H8M9 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 130.6 ms