Protein–RNA interactions for Protein: A4FU49

SH3D21, SH3 domain-containing protein 21, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21A4FU49 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SH3D21A4FU49 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.26■□□□□ 0.83
SH3D21A4FU49 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SH3D21A4FU49 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SH3D21A4FU49 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SH3D21A4FU49 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SH3D21A4FU49 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.26■□□□□ 0.83
SH3D21A4FU49 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.26■□□□□ 0.83
SH3D21A4FU49 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.26■□□□□ 0.83
SH3D21A4FU49 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.26■□□□□ 0.83
SH3D21A4FU49 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SH3D21A4FU49 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
SH3D21A4FU49 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SH3D21A4FU49 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.26■□□□□ 0.83
SH3D21A4FU49 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SH3D21A4FU49 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SH3D21A4FU49 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
SH3D21A4FU49 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
SH3D21A4FU49 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
SH3D21A4FU49 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SH3D21A4FU49 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
SH3D21A4FU49 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.25■□□□□ 0.83
SH3D21A4FU49 AC005837.3-201ENST00000612163 286 ntBASIC20.25■□□□□ 0.83
SH3D21A4FU49 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SH3D21A4FU49 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SH3D21A4FU49 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
SH3D21A4FU49 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SH3D21A4FU49 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SH3D21A4FU49 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.25■□□□□ 0.83
SH3D21A4FU49 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SH3D21A4FU49 PKD1P6-201ENST00000343738 4769 ntBASIC20.25■□□□□ 0.83
SH3D21A4FU49 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SH3D21A4FU49 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.24■□□□□ 0.83
SH3D21A4FU49 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SH3D21A4FU49 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SH3D21A4FU49 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.24■□□□□ 0.83
SH3D21A4FU49 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SH3D21A4FU49 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SH3D21A4FU49 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SH3D21A4FU49 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SH3D21A4FU49 AL137060.1-201ENST00000618151 2648 ntBASIC20.24■□□□□ 0.83
SH3D21A4FU49 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SH3D21A4FU49 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SH3D21A4FU49 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
SH3D21A4FU49 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.24■□□□□ 0.83
SH3D21A4FU49 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SH3D21A4FU49 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
SH3D21A4FU49 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SH3D21A4FU49 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SH3D21A4FU49 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SH3D21A4FU49 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SH3D21A4FU49 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
SH3D21A4FU49 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
SH3D21A4FU49 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SH3D21A4FU49 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SH3D21A4FU49 AC131274.2-201ENST00000580697 1507 ntBASIC20.23■□□□□ 0.83
SH3D21A4FU49 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SH3D21A4FU49 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SH3D21A4FU49 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
SH3D21A4FU49 AC079630.1-202ENST00000618127 1840 ntBASIC20.23■□□□□ 0.83
SH3D21A4FU49 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SH3D21A4FU49 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SH3D21A4FU49 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SH3D21A4FU49 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SH3D21A4FU49 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SH3D21A4FU49 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.22■□□□□ 0.83
SH3D21A4FU49 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SH3D21A4FU49 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SH3D21A4FU49 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SH3D21A4FU49 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SH3D21A4FU49 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.22■□□□□ 0.83
SH3D21A4FU49 AC133561.4-201ENST00000566112 224 ntBASIC20.22■□□□□ 0.83
SH3D21A4FU49 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.22■□□□□ 0.83
SH3D21A4FU49 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SH3D21A4FU49 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SH3D21A4FU49 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SH3D21A4FU49 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SH3D21A4FU49 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
SH3D21A4FU49 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SH3D21A4FU49 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.21■□□□□ 0.83
SH3D21A4FU49 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.21■□□□□ 0.83
SH3D21A4FU49 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.21■□□□□ 0.83
SH3D21A4FU49 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SH3D21A4FU49 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.21■□□□□ 0.83
SH3D21A4FU49 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.21■□□□□ 0.83
SH3D21A4FU49 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.21■□□□□ 0.83
SH3D21A4FU49 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SH3D21A4FU49 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SH3D21A4FU49 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
SH3D21A4FU49 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.21■□□□□ 0.83
SH3D21A4FU49 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.21■□□□□ 0.83
SH3D21A4FU49 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SH3D21A4FU49 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SH3D21A4FU49 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SH3D21A4FU49 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.2■□□□□ 0.82
SH3D21A4FU49 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
SH3D21A4FU49 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.2■□□□□ 0.82
SH3D21A4FU49 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
SH3D21A4FU49 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
SH3D21A4FU49 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms