Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRDV1A0A1B0GX56 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRDV1A0A1B0GX56 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRDV1A0A1B0GX56 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.27■□□□□ 0.68
TRDV1A0A1B0GX56 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
TRDV1A0A1B0GX56 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
TRDV1A0A1B0GX56 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.27■□□□□ 0.67
TRDV1A0A1B0GX56 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.26■□□□□ 0.67
TRDV1A0A1B0GX56 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.26■□□□□ 0.67
TRDV1A0A1B0GX56 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
TRDV1A0A1B0GX56 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRDV1A0A1B0GX56 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.26■□□□□ 0.67
TRDV1A0A1B0GX56 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRDV1A0A1B0GX56 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRDV1A0A1B0GX56 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
TRDV1A0A1B0GX56 AF131216.4-201ENST00000638924 1588 ntBASIC19.26■□□□□ 0.67
TRDV1A0A1B0GX56 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRDV1A0A1B0GX56 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRDV1A0A1B0GX56 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRDV1A0A1B0GX56 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
TRDV1A0A1B0GX56 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.25■□□□□ 0.67
TRDV1A0A1B0GX56 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRDV1A0A1B0GX56 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRDV1A0A1B0GX56 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRDV1A0A1B0GX56 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRDV1A0A1B0GX56 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.25■□□□□ 0.67
TRDV1A0A1B0GX56 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRDV1A0A1B0GX56 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRDV1A0A1B0GX56 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRDV1A0A1B0GX56 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRDV1A0A1B0GX56 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.25■□□□□ 0.67
TRDV1A0A1B0GX56 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRDV1A0A1B0GX56 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRDV1A0A1B0GX56 MIR7108-201ENST00000614319 87 ntBASIC19.25■□□□□ 0.67
TRDV1A0A1B0GX56 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.25■□□□□ 0.67
TRDV1A0A1B0GX56 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRDV1A0A1B0GX56 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRDV1A0A1B0GX56 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRDV1A0A1B0GX56 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRDV1A0A1B0GX56 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRDV1A0A1B0GX56 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRDV1A0A1B0GX56 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
TRDV1A0A1B0GX56 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRDV1A0A1B0GX56 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.24■□□□□ 0.67
TRDV1A0A1B0GX56 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
TRDV1A0A1B0GX56 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRDV1A0A1B0GX56 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC19.24■□□□□ 0.67
TRDV1A0A1B0GX56 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRDV1A0A1B0GX56 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRDV1A0A1B0GX56 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRDV1A0A1B0GX56 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.24■□□□□ 0.67
TRDV1A0A1B0GX56 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
TRDV1A0A1B0GX56 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRDV1A0A1B0GX56 Z98882.1-201ENST00000622160 2253 ntBASIC19.23■□□□□ 0.67
TRDV1A0A1B0GX56 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRDV1A0A1B0GX56 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC19.23■□□□□ 0.67
TRDV1A0A1B0GX56 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRDV1A0A1B0GX56 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRDV1A0A1B0GX56 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
TRDV1A0A1B0GX56 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
TRDV1A0A1B0GX56 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.23■□□□□ 0.67
TRDV1A0A1B0GX56 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRDV1A0A1B0GX56 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRDV1A0A1B0GX56 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRDV1A0A1B0GX56 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.23■□□□□ 0.67
TRDV1A0A1B0GX56 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRDV1A0A1B0GX56 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.23■□□□□ 0.67
TRDV1A0A1B0GX56 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRDV1A0A1B0GX56 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
TRDV1A0A1B0GX56 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRDV1A0A1B0GX56 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
TRDV1A0A1B0GX56 LINC01521-201ENST00000504184 1943 ntBASIC19.22■□□□□ 0.67
TRDV1A0A1B0GX56 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRDV1A0A1B0GX56 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRDV1A0A1B0GX56 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRDV1A0A1B0GX56 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRDV1A0A1B0GX56 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRDV1A0A1B0GX56 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRDV1A0A1B0GX56 LINC01529-204ENST00000636474 1715 ntBASIC19.22■□□□□ 0.67
TRDV1A0A1B0GX56 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
TRDV1A0A1B0GX56 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRDV1A0A1B0GX56 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRDV1A0A1B0GX56 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRDV1A0A1B0GX56 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRDV1A0A1B0GX56 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRDV1A0A1B0GX56 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRDV1A0A1B0GX56 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRDV1A0A1B0GX56 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRDV1A0A1B0GX56 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRDV1A0A1B0GX56 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRDV1A0A1B0GX56 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRDV1A0A1B0GX56 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRDV1A0A1B0GX56 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.21■□□□□ 0.67
TRDV1A0A1B0GX56 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.21■□□□□ 0.67
TRDV1A0A1B0GX56 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.21■□□□□ 0.67
TRDV1A0A1B0GX56 AC019171.1-201ENST00000601251 1056 ntBASIC19.21■□□□□ 0.67
TRDV1A0A1B0GX56 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRDV1A0A1B0GX56 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRDV1A0A1B0GX56 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRDV1A0A1B0GX56 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms