Protein–RNA interactions for Protein: A0A0B4J240

TRAV10, T-cell receptor alpha variable 10 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV10A0A0B4J240 AL031602.1-201ENST00000633169 911 ntBASIC15.47■□□□□ 0.07
TRAV10A0A0B4J240 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV10A0A0B4J240 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC15.47■□□□□ 0.07
TRAV10A0A0B4J240 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV10A0A0B4J240 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV10A0A0B4J240 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC15.47■□□□□ 0.07
TRAV10A0A0B4J240 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
TRAV10A0A0B4J240 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
TRAV10A0A0B4J240 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV10A0A0B4J240 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV10A0A0B4J240 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV10A0A0B4J240 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV10A0A0B4J240 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV10A0A0B4J240 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC15.46■□□□□ 0.07
TRAV10A0A0B4J240 DUX4L2-201ENST00000561772 1275 ntBASIC15.46■□□□□ 0.07
TRAV10A0A0B4J240 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC15.46■□□□□ 0.07
TRAV10A0A0B4J240 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC15.46■□□□□ 0.07
TRAV10A0A0B4J240 DUX4L6-201ENST00000626483 1275 ntBASIC15.46■□□□□ 0.07
TRAV10A0A0B4J240 DUX4L1-201ENST00000627662 1275 ntBASIC15.46■□□□□ 0.07
TRAV10A0A0B4J240 DUX4L8-201ENST00000629013 1275 ntBASIC15.46■□□□□ 0.07
TRAV10A0A0B4J240 DUX4L3-201ENST00000630187 1275 ntBASIC15.46■□□□□ 0.07
TRAV10A0A0B4J240 DUX4L7-201ENST00000630678 1275 ntBASIC15.46■□□□□ 0.07
TRAV10A0A0B4J240 DUX4L5-201ENST00000630834 1275 ntBASIC15.46■□□□□ 0.07
TRAV10A0A0B4J240 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV10A0A0B4J240 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV10A0A0B4J240 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
TRAV10A0A0B4J240 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
TRAV10A0A0B4J240 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC15.46■□□□□ 0.06
TRAV10A0A0B4J240 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV10A0A0B4J240 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV10A0A0B4J240 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
TRAV10A0A0B4J240 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV10A0A0B4J240 EI24-211ENST00000534546 1544 ntTSL 2 BASIC15.45■□□□□ 0.06
TRAV10A0A0B4J240 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV10A0A0B4J240 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV10A0A0B4J240 HACD1-201ENST00000326961 773 ntTSL 2 BASIC15.45■□□□□ 0.06
TRAV10A0A0B4J240 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
TRAV10A0A0B4J240 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV10A0A0B4J240 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
TRAV10A0A0B4J240 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
TRAV10A0A0B4J240 KRT18P5-201ENST00000436075 1291 ntBASIC15.45■□□□□ 0.06
TRAV10A0A0B4J240 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
TRAV10A0A0B4J240 KRT18P14-201ENST00000534205 1250 ntBASIC15.45■□□□□ 0.06
TRAV10A0A0B4J240 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV10A0A0B4J240 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC15.45■□□□□ 0.06
TRAV10A0A0B4J240 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC15.45■□□□□ 0.06
TRAV10A0A0B4J240 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV10A0A0B4J240 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV10A0A0B4J240 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV10A0A0B4J240 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC15.45■□□□□ 0.06
TRAV10A0A0B4J240 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV10A0A0B4J240 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
TRAV10A0A0B4J240 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV10A0A0B4J240 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV10A0A0B4J240 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV10A0A0B4J240 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV10A0A0B4J240 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV10A0A0B4J240 AL137784.2-201ENST00000607332 1000 ntBASIC15.44■□□□□ 0.06
TRAV10A0A0B4J240 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV10A0A0B4J240 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC15.44■□□□□ 0.06
TRAV10A0A0B4J240 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV10A0A0B4J240 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV10A0A0B4J240 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV10A0A0B4J240 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV10A0A0B4J240 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV10A0A0B4J240 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV10A0A0B4J240 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC15.43■□□□□ 0.06
TRAV10A0A0B4J240 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV10A0A0B4J240 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC15.43■□□□□ 0.06
TRAV10A0A0B4J240 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
TRAV10A0A0B4J240 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV10A0A0B4J240 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
TRAV10A0A0B4J240 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV10A0A0B4J240 GXYLT1P2-201ENST00000433312 1230 ntBASIC15.43■□□□□ 0.06
TRAV10A0A0B4J240 TERF1P2-201ENST00000583350 1212 ntBASIC15.43■□□□□ 0.06
TRAV10A0A0B4J240 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC15.43■□□□□ 0.06
TRAV10A0A0B4J240 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
TRAV10A0A0B4J240 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV10A0A0B4J240 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC15.43■□□□□ 0.06
TRAV10A0A0B4J240 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC15.43■□□□□ 0.06
TRAV10A0A0B4J240 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
TRAV10A0A0B4J240 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV10A0A0B4J240 PREB-202ENST00000406567 1910 ntTSL 5 BASIC15.43■□□□□ 0.06
TRAV10A0A0B4J240 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC15.43■□□□□ 0.06
TRAV10A0A0B4J240 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC15.43■□□□□ 0.06
TRAV10A0A0B4J240 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC15.43■□□□□ 0.06
TRAV10A0A0B4J240 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV10A0A0B4J240 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV10A0A0B4J240 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV10A0A0B4J240 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV10A0A0B4J240 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC15.42■□□□□ 0.06
TRAV10A0A0B4J240 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV10A0A0B4J240 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV10A0A0B4J240 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV10A0A0B4J240 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV10A0A0B4J240 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC15.42■□□□□ 0.06
TRAV10A0A0B4J240 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC15.42■□□□□ 0.06
TRAV10A0A0B4J240 H19-210ENST00000439725 1929 ntTSL 2 BASIC15.42■□□□□ 0.06
TRAV10A0A0B4J240 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV10A0A0B4J240 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms