Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC15.44■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC15.44■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC15.44■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC15.43■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 SNX5-217ENST00000606557 1087 ntBASIC15.43■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 MIR6722-201ENST00000617286 78 ntBASIC15.43■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC15.43■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC15.43■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC15.43■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 AC131274.2-201ENST00000580697 1507 ntBASIC15.43■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC15.43■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC15.42■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC15.42■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC15.42■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC15.42■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 GUSBP5-201ENST00000418136 578 ntBASIC15.42■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 SENP5-202ENST00000419026 973 ntTSL 3 BASIC15.42■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC15.42■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 TSPY9P-201ENST00000440215 945 ntBASIC15.42■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 TSPY11P-201ENST00000442607 1045 ntBASIC15.42■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC15.42■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC15.42■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 CLTA-210ENST00000540080 989 ntTSL 2 BASIC15.42■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC15.42■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC15.41■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC15.41■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC15.41■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC15.41■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC15.41■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC15.4■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC15.4■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC15.4■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC15.4■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC15.4■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC15.4■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 AC010997.5-201ENST00000609182 354 ntBASIC15.4■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC15.4■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC15.4■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV8-3A0A0A6YYJ7 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC15.39■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV8-3A0A0A6YYJ7 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms