Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC12.25□□□□□ -0.45
CLK1P49759 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC12.25□□□□□ -0.45
CLK1P49759 AC102953.1-201ENST00000445345 498 ntTSL 2 BASIC12.25□□□□□ -0.45
CLK1P49759 AL512288.1-201ENST00000448015 491 ntTSL 5 BASIC12.25□□□□□ -0.45
CLK1P49759 AC019118.1-201ENST00000454530 435 ntTSL 3 BASIC12.25□□□□□ -0.45
CLK1P49759 AC079112.1-201ENST00000454972 939 ntBASIC12.25□□□□□ -0.45
CLK1P49759 RN7SL181P-201ENST00000462921 277 ntBASIC12.25□□□□□ -0.45
CLK1P49759 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC12.25□□□□□ -0.45
CLK1P49759 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC12.25□□□□□ -0.45
CLK1P49759 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC12.25□□□□□ -0.45
CLK1P49759 CFL1-214ENST00000534769 758 ntTSL 2 BASIC12.25□□□□□ -0.45
CLK1P49759 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CLK1P49759 LINC00677-201ENST00000558224 486 ntTSL 3 BASIC12.25□□□□□ -0.45
CLK1P49759 AC026583.1-201ENST00000561310 569 ntTSL 4 BASIC12.25□□□□□ -0.45
CLK1P49759 MT3-202ENST00000561640 514 ntTSL 3 BASIC12.25□□□□□ -0.45
CLK1P49759 CES1P2-201ENST00000566467 1242 ntBASIC12.25□□□□□ -0.45
CLK1P49759 NT5C-204ENST00000578337 582 ntTSL 2 BASIC12.25□□□□□ -0.45
CLK1P49759 RN7SL556P-201ENST00000582856 298 ntBASIC12.25□□□□□ -0.45
CLK1P49759 AC107464.3-201ENST00000609172 737 ntBASIC12.25□□□□□ -0.45
CLK1P49759 CSTP2-201ENST00000610599 398 ntBASIC12.25□□□□□ -0.45
CLK1P49759 AKT1-208ENST00000554581 3916 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CLK1P49759 SHPRH-201ENST00000275233 6649 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CLK1P49759 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CLK1P49759 GRAMD1B-215ENST00000638086 2665 ntTSL 5 BASIC12.25□□□□□ -0.45
CLK1P49759 ARHGAP36-203ENST00000370922 2736 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CLK1P49759 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
CLK1P49759 SUOX-203ENST00000394109 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CLK1P49759 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
CLK1P49759 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC12.25□□□□□ -0.45
CLK1P49759 ROBO4-208ENST00000533054 3071 ntTSL 2 BASIC12.25□□□□□ -0.45
CLK1P49759 CTPS1-202ENST00000372621 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CLK1P49759 PDHA1-206ENST00000422285 3310 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
CLK1P49759 LINC00943-204ENST00000537374 1688 ntTSL 5 BASIC12.25□□□□□ -0.45
CLK1P49759 ELP4-202ENST00000379163 1700 ntTSL 2 BASIC12.25□□□□□ -0.45
CLK1P49759 ANKRD34A-201ENST00000606888 3613 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
CLK1P49759 ATP6V1B1-201ENST00000234396 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CLK1P49759 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC12.25□□□□□ -0.45
CLK1P49759 TCF4-276ENST00000635822 7805 ntTSL 5 BASIC12.25□□□□□ -0.45
CLK1P49759 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC12.25□□□□□ -0.45
CLK1P49759 ETV5-201ENST00000306376 4111 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CLK1P49759 BHMT2-201ENST00000255192 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CLK1P49759 AGPAT1-204ENST00000395496 2103 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
CLK1P49759 PACRG-AS1-201ENST00000626335 2192 ntTSL 2 BASIC12.25□□□□□ -0.45
CLK1P49759 RPS10P7-201ENST00000441932 2329 ntTSL 2 BASIC12.25□□□□□ -0.45
CLK1P49759 TSNAXIP1-201ENST00000388833 2429 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
CLK1P49759 SYBU-203ENST00000408889 2776 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
CLK1P49759 SLC5A9-203ENST00000438567 3195 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
CLK1P49759 HPS1-201ENST00000325103 3703 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
CLK1P49759 EMG1-202ENST00000599672 4898 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CLK1P49759 NLRP1-208ENST00000571451 5444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CLK1P49759 UBE3B-203ENST00000434735 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CLK1P49759 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CLK1P49759 AMBRA1-201ENST00000314845 5023 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CLK1P49759 KRBA1-201ENST00000319551 4020 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CLK1P49759 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
CLK1P49759 KRT26-201ENST00000335552 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CLK1P49759 ZMAT5-201ENST00000344318 899 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CLK1P49759 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CLK1P49759 NFIX-201ENST00000358552 1727 ntTSL 5 BASIC12.24□□□□□ -0.45
CLK1P49759 CAMSAP2-202ENST00000358823 7352 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
CLK1P49759 GPR37L1-201ENST00000367282 6588 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CLK1P49759 PTGFR-202ENST00000370757 4379 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CLK1P49759 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
CLK1P49759 POLR3F-201ENST00000377603 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CLK1P49759 SERPING1-203ENST00000378323 1733 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
CLK1P49759 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CLK1P49759 LILRB3-203ENST00000391750 2848 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
CLK1P49759 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CLK1P49759 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
CLK1P49759 MPV17-204ENST00000399052 749 ntTSL 4 BASIC12.24□□□□□ -0.45
CLK1P49759 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
CLK1P49759 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC12.24□□□□□ -0.45
CLK1P49759 ENTPD3-203ENST00000445129 1658 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CLK1P49759 IP6K2-221ENST00000449610 1673 ntTSL 2 BASIC12.24□□□□□ -0.45
CLK1P49759 TRIM32-203ENST00000450136 3717 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CLK1P49759 AC092335.1-201ENST00000509037 2066 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CLK1P49759 PIGCP1-201ENST00000527583 895 ntBASIC12.24□□□□□ -0.45
CLK1P49759 AL161668.2-201ENST00000531638 492 ntTSL 5 BASIC12.24□□□□□ -0.45
CLK1P49759 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC12.24□□□□□ -0.45
CLK1P49759 AC226150.1-201ENST00000544259 466 ntBASIC12.24□□□□□ -0.45
CLK1P49759 MMP19-206ENST00000548629 1813 ntTSL 5 BASIC12.24□□□□□ -0.45
CLK1P49759 DLK1-205ENST00000556051 469 ntTSL 2 BASIC12.24□□□□□ -0.45
CLK1P49759 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC12.24□□□□□ -0.45
CLK1P49759 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC12.24□□□□□ -0.45
CLK1P49759 AC002550.1-201ENST00000565916 1379 ntTSL 5 BASIC12.24□□□□□ -0.45
CLK1P49759 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CLK1P49759 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
CLK1P49759 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
CLK1P49759 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC12.24□□□□□ -0.45
CLK1P49759 AC087045.2-201ENST00000606279 1003 ntBASIC12.24□□□□□ -0.45
CLK1P49759 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC12.24□□□□□ -0.45
CLK1P49759 BICRAL-203ENST00000614467 6510 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CLK1P49759 AC007336.3-201ENST00000623886 2160 ntBASIC12.24□□□□□ -0.45
CLK1P49759 SON-201ENST00000300278 7477 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CLK1P49759 DNMBP-201ENST00000324109 6400 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CLK1P49759 TMEM199-201ENST00000292114 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CLK1P49759 KCNH6-201ENST00000314672 3062 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
CLK1P49759 TFIP11-203ENST00000407431 2974 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
CLK1P49759 CYFIP1-207ENST00000617556 5674 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CLK1P49759 XAB2-201ENST00000358368 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms