Protein–RNA interactions for Protein: F8W1W9

NPIPB9, Nuclear pore complex-interacting protein family member B9, humanhuman

Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB9F8W1W9 AC106872.8-201ENST00000507651 684 ntBASIC11.8□□□□□ -0.52
NPIPB9F8W1W9 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC11.8□□□□□ -0.52
NPIPB9F8W1W9 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
NPIPB9F8W1W9 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC11.8□□□□□ -0.52
NPIPB9F8W1W9 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NPIPB9F8W1W9 ZNF816-208ENST00000535506 529 ntTSL 4 BASIC11.8□□□□□ -0.52
NPIPB9F8W1W9 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC11.8□□□□□ -0.52
NPIPB9F8W1W9 AC007610.1-201ENST00000568130 498 ntTSL 3 BASIC11.8□□□□□ -0.52
NPIPB9F8W1W9 USE1-207ENST00000596136 637 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
NPIPB9F8W1W9 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC11.8□□□□□ -0.52
NPIPB9F8W1W9 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC11.8□□□□□ -0.52
NPIPB9F8W1W9 ITGB2-AS1-204ENST00000609592 482 ntTSL 5 BASIC11.8□□□□□ -0.52
NPIPB9F8W1W9 RETN-203ENST00000629642 400 ntTSL 5 BASIC11.8□□□□□ -0.52
NPIPB9F8W1W9 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
NPIPB9F8W1W9 HIF3A-204ENST00000300862 2551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
NPIPB9F8W1W9 DGKZP1-201ENST00000378718 2776 ntBASIC11.8□□□□□ -0.52
NPIPB9F8W1W9 PRAMEF14-201ENST00000334600 1690 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
NPIPB9F8W1W9 FAM95C-205ENST00000637556 2421 ntAPPRIS P5 TSL 2 BASIC11.8□□□□□ -0.52
NPIPB9F8W1W9 LRRC41-206ENST00000615587 2842 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
NPIPB9F8W1W9 DCAF16-201ENST00000382247 4548 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
NPIPB9F8W1W9 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
NPIPB9F8W1W9 LINC02202-201ENST00000499583 2664 ntTSL 2 BASIC11.8□□□□□ -0.52
NPIPB9F8W1W9 TRIM25-202ENST00000537230 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
NPIPB9F8W1W9 AC026725.1-201ENST00000511327 1588 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPB9F8W1W9 AC140481.3-201ENST00000450440 1762 ntTSL 2 BASIC11.79□□□□□ -0.52
NPIPB9F8W1W9 ZNF287-201ENST00000395824 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPB9F8W1W9 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPB9F8W1W9 TRAF5-203ENST00000367004 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPB9F8W1W9 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPB9F8W1W9 CCT7P1-201ENST00000406551 1611 ntBASIC11.79□□□□□ -0.52
NPIPB9F8W1W9 PEX11B-203ENST00000537888 1632 ntTSL 2 BASIC11.79□□□□□ -0.52
NPIPB9F8W1W9 AL138762.1-201ENST00000608554 1637 ntBASIC11.79□□□□□ -0.52
NPIPB9F8W1W9 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPB9F8W1W9 C10orf76-202ENST00000370033 4119 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
NPIPB9F8W1W9 APTX-201ENST00000309615 1859 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPB9F8W1W9 PYGO2-202ENST00000368457 3146 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPB9F8W1W9 ZWINT-203ENST00000373944 1872 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPB9F8W1W9 ZNF155-207ENST00000590615 1888 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPB9F8W1W9 GREM2-201ENST00000318160 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPB9F8W1W9 PPP1R11-204ENST00000376769 1689 ntTSL 2 BASIC11.79□□□□□ -0.52
NPIPB9F8W1W9 AL157838.1-201ENST00000424252 2502 ntTSL 2 BASIC11.79□□□□□ -0.52
NPIPB9F8W1W9 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPB9F8W1W9 SH3GLB2-206ENST00000417224 1468 ntTSL 5 BASIC11.79□□□□□ -0.52
NPIPB9F8W1W9 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC11.79□□□□□ -0.52
NPIPB9F8W1W9 AP000346.2-202ENST00000425948 383 ntBASIC11.79□□□□□ -0.52
NPIPB9F8W1W9 LINC00303-203ENST00000427799 1028 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPB9F8W1W9 PRR13-202ENST00000429243 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPB9F8W1W9 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC11.79□□□□□ -0.52
NPIPB9F8W1W9 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC11.79□□□□□ -0.52
NPIPB9F8W1W9 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC11.79□□□□□ -0.52
NPIPB9F8W1W9 BRI3P1-201ENST00000440440 378 ntBASIC11.79□□□□□ -0.52
NPIPB9F8W1W9 AC092896.1-201ENST00000465850 380 ntBASIC11.79□□□□□ -0.52
NPIPB9F8W1W9 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
NPIPB9F8W1W9 CASP3-205ENST00000517513 964 ntTSL 5 BASIC11.79□□□□□ -0.52
NPIPB9F8W1W9 DPYSL2-206ENST00000523027 2130 ntTSL 2 BASIC11.79□□□□□ -0.52
NPIPB9F8W1W9 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
NPIPB9F8W1W9 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPB9F8W1W9 AC063924.1-201ENST00000546680 673 ntBASIC11.79□□□□□ -0.52
NPIPB9F8W1W9 LINC02328-202ENST00000554647 522 ntTSL 4 BASIC11.79□□□□□ -0.52
NPIPB9F8W1W9 HMGB1P24-201ENST00000611897 328 ntBASIC11.79□□□□□ -0.52
NPIPB9F8W1W9 GSTT2-202ENST00000621118 1112 ntTSL 5 BASIC11.79□□□□□ -0.52
NPIPB9F8W1W9 AC048382.6-201ENST00000621980 1223 ntBASIC11.79□□□□□ -0.52
NPIPB9F8W1W9 KRT17P5-202ENST00000444070 2552 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPB9F8W1W9 ARHGEF1-203ENST00000354532 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPB9F8W1W9 AC021752.1-202ENST00000613161 2398 ntTSL 2 BASIC11.79□□□□□ -0.52
NPIPB9F8W1W9 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPB9F8W1W9 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPB9F8W1W9 TRIM37-202ENST00000393065 3548 ntTSL 2 BASIC11.79□□□□□ -0.52
NPIPB9F8W1W9 SNX12-207ENST00000622277 2422 ntAPPRIS P3 TSL 4 BASIC11.79□□□□□ -0.52
NPIPB9F8W1W9 HNRNPMP1-201ENST00000560685 1768 ntBASIC11.79□□□□□ -0.52
NPIPB9F8W1W9 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC11.79□□□□□ -0.52
NPIPB9F8W1W9 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC11.79□□□□□ -0.52
NPIPB9F8W1W9 TRIM39-204ENST00000396548 3198 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
NPIPB9F8W1W9 ANKRD49-210ENST00000544612 2268 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
NPIPB9F8W1W9 SIRPA-204ENST00000622179 4570 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
NPIPB9F8W1W9 FOXD2-AS1-201ENST00000445551 2509 ntBASIC11.79□□□□□ -0.52
NPIPB9F8W1W9 MIR193BHG-211ENST00000641433 5365 ntBASIC11.78□□□□□ -0.52
NPIPB9F8W1W9 ALOX15P2-201ENST00000340858 1897 ntBASIC11.78□□□□□ -0.52
NPIPB9F8W1W9 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NPIPB9F8W1W9 APOL3-201ENST00000349314 2117 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
NPIPB9F8W1W9 PCGF2-204ENST00000616199 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NPIPB9F8W1W9 CA10-202ENST00000442502 2935 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NPIPB9F8W1W9 IGF2BP2-203ENST00000421047 1711 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
NPIPB9F8W1W9 LINC01106-201ENST00000436665 2244 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
NPIPB9F8W1W9 ZNF287-202ENST00000395825 3208 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NPIPB9F8W1W9 LINC01447-201ENST00000429010 2761 ntTSL 2 BASIC11.78□□□□□ -0.52
NPIPB9F8W1W9 FOXN3-201ENST00000261302 2542 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
NPIPB9F8W1W9 SLURP1-201ENST00000246515 537 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NPIPB9F8W1W9 PTGER4P2-201ENST00000328411 252 ntBASIC11.78□□□□□ -0.52
NPIPB9F8W1W9 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
NPIPB9F8W1W9 HDGF-202ENST00000368206 960 ntTSL 5 BASIC11.78□□□□□ -0.52
NPIPB9F8W1W9 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC11.78□□□□□ -0.52
NPIPB9F8W1W9 TOMM5-202ENST00000377773 808 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
NPIPB9F8W1W9 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
NPIPB9F8W1W9 AQP7P1-201ENST00000412626 1045 ntBASIC11.78□□□□□ -0.52
NPIPB9F8W1W9 AP001331.1-201ENST00000413008 1015 ntBASIC11.78□□□□□ -0.52
NPIPB9F8W1W9 SAPCD1-AS1-202ENST00000419679 461 ntTSL 3 BASIC11.78□□□□□ -0.52
NPIPB9F8W1W9 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC11.78□□□□□ -0.52
NPIPB9F8W1W9 AC006328.1-201ENST00000437571 379 ntBASIC11.78□□□□□ -0.52
NPIPB9F8W1W9 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms