Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC13.6□□□□□ -0.23
SLC1A1P43005 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC13.6□□□□□ -0.23
SLC1A1P43005 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
SLC1A1P43005 OR2A25-203ENST00000641663 1741 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
SLC1A1P43005 ST3GAL2-202ENST00000393640 8872 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SLC1A1P43005 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SLC1A1P43005 DUSP16-201ENST00000228862 3402 ntTSL 5 BASIC13.6□□□□□ -0.23
SLC1A1P43005 ITIH5-201ENST00000397145 3132 ntTSL 2 BASIC13.6□□□□□ -0.23
SLC1A1P43005 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
SLC1A1P43005 TIAF1-201ENST00000359450 5337 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
SLC1A1P43005 SARDH-204ENST00000371872 3344 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SLC1A1P43005 ST3GAL3-202ENST00000330208 1479 ntTSL 5 BASIC13.6□□□□□ -0.23
SLC1A1P43005 KRT8P15-201ENST00000425226 1451 ntBASIC13.6□□□□□ -0.23
SLC1A1P43005 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC13.6□□□□□ -0.23
SLC1A1P43005 AC006480.2-201ENST00000609770 1337 ntBASIC13.6□□□□□ -0.23
SLC1A1P43005 KCNMA1-208ENST00000372440 3849 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
SLC1A1P43005 KCNMA1-227ENST00000638203 3840 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
SLC1A1P43005 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
SLC1A1P43005 KCNMA1-233ENST00000638351 3849 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
SLC1A1P43005 SNX12-207ENST00000622277 2422 ntAPPRIS P3 TSL 4 BASIC13.6□□□□□ -0.23
SLC1A1P43005 TBC1D31-201ENST00000287380 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SLC1A1P43005 CYLD-214ENST00000569418 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SLC1A1P43005 PRKAG2-202ENST00000392801 2281 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SLC1A1P43005 PUDP-201ENST00000381077 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SLC1A1P43005 CDK5RAP3-202ENST00000536708 1975 ntTSL 2 BASIC13.6□□□□□ -0.23
SLC1A1P43005 KLHL7-202ENST00000339077 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SLC1A1P43005 PVT1-203ENST00000513868 1699 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SLC1A1P43005 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SLC1A1P43005 AXIN1-202ENST00000354866 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SLC1A1P43005 GRM4-209ENST00000609222 3176 ntTSL 2 BASIC13.59□□□□□ -0.23
SLC1A1P43005 CLPX-201ENST00000300107 4695 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SLC1A1P43005 SUOX-203ENST00000394109 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SLC1A1P43005 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
SLC1A1P43005 LINC01134-203ENST00000442673 3059 ntTSL 2 BASIC13.59□□□□□ -0.23
SLC1A1P43005 NRF1-201ENST00000223190 2424 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
SLC1A1P43005 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SLC1A1P43005 APOBR-201ENST00000431282 3765 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
SLC1A1P43005 APOBR-202ENST00000564831 3792 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SLC1A1P43005 MYO19-203ENST00000610930 3271 ntTSL 5 BASIC13.59□□□□□ -0.23
SLC1A1P43005 POMT1-203ENST00000372228 3123 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SLC1A1P43005 ZP4-201ENST00000366570 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SLC1A1P43005 SEMA4D-212ENST00000450295 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SLC1A1P43005 HIGD2A-201ENST00000274787 668 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SLC1A1P43005 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SLC1A1P43005 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SLC1A1P43005 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SLC1A1P43005 POLR2F-202ENST00000405557 560 ntTSL 5 BASIC13.59□□□□□ -0.23
SLC1A1P43005 PRR13-202ENST00000429243 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SLC1A1P43005 GAPDHP29-201ENST00000429913 985 ntBASIC13.59□□□□□ -0.23
SLC1A1P43005 ASS1P2-201ENST00000439895 1223 ntBASIC13.59□□□□□ -0.23
SLC1A1P43005 BRI3P1-201ENST00000440440 378 ntBASIC13.59□□□□□ -0.23
SLC1A1P43005 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
SLC1A1P43005 P2RX6P-202ENST00000450626 357 ntBASIC13.59□□□□□ -0.23
SLC1A1P43005 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
SLC1A1P43005 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC13.59□□□□□ -0.23
SLC1A1P43005 AL662899.2-201ENST00000503322 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SLC1A1P43005 CMTM1-219ENST00000533953 934 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SLC1A1P43005 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC13.59□□□□□ -0.23
SLC1A1P43005 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC13.59□□□□□ -0.23
SLC1A1P43005 C2orf69P1-201ENST00000563532 1093 ntBASIC13.59□□□□□ -0.23
SLC1A1P43005 SEPT4-AS1-203ENST00000580769 1000 ntTSL 3 BASIC13.59□□□□□ -0.23
SLC1A1P43005 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC13.59□□□□□ -0.23
SLC1A1P43005 AC011458.2-201ENST00000603937 207 ntBASIC13.59□□□□□ -0.23
SLC1A1P43005 POLR2F-213ENST00000606538 760 ntTSL 2 BASIC13.59□□□□□ -0.23
SLC1A1P43005 TNFRSF10A-204ENST00000613472 978 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SLC1A1P43005 COX6A1P2-201ENST00000620597 330 ntBASIC13.59□□□□□ -0.23
SLC1A1P43005 MIR6858-201ENST00000620733 67 ntBASIC13.59□□□□□ -0.23
SLC1A1P43005 PGGHG-203ENST00000409548 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SLC1A1P43005 PLAU-201ENST00000372764 2321 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
SLC1A1P43005 P2RX1-201ENST00000225538 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SLC1A1P43005 TSGA10-201ENST00000355053 3037 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SLC1A1P43005 CHEK1-203ENST00000428830 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SLC1A1P43005 SEC14L1-203ENST00000431431 2504 ntTSL 2 BASIC13.59□□□□□ -0.23
SLC1A1P43005 FOSB-204ENST00000585836 3550 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SLC1A1P43005 EFHB-202ENST00000344838 2389 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
SLC1A1P43005 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
SLC1A1P43005 AC126564.1-201ENST00000623628 2013 ntBASIC13.59□□□□□ -0.23
SLC1A1P43005 SLC25A3-202ENST00000228318 1678 ntAPPRIS P4 TSL 5 BASIC13.59□□□□□ -0.23
SLC1A1P43005 ANKRD34A-201ENST00000606888 3613 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
SLC1A1P43005 RALGPS1-201ENST00000259351 6336 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SLC1A1P43005 PKM-222ENST00000568883 1863 ntTSL 5 BASIC13.59□□□□□ -0.23
SLC1A1P43005 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SLC1A1P43005 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SLC1A1P43005 DRAM1-201ENST00000258534 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SLC1A1P43005 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
SLC1A1P43005 BANK1-202ENST00000428908 3044 ntTSL 5 BASIC13.58□□□□□ -0.23
SLC1A1P43005 AL512378.1-201ENST00000394808 2100 ntBASIC13.58□□□□□ -0.23
SLC1A1P43005 PMEL-201ENST00000449260 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
SLC1A1P43005 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC13.58□□□□□ -0.23
SLC1A1P43005 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
SLC1A1P43005 GAS6-AS2-201ENST00000608651 1952 ntTSL 2 BASIC13.58□□□□□ -0.24
SLC1A1P43005 LINC02125-201ENST00000512279 2198 ntTSL 2 BASIC13.58□□□□□ -0.24
SLC1A1P43005 AOC2-202ENST00000452774 2572 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SLC1A1P43005 PEX11B-203ENST00000537888 1632 ntTSL 2 BASIC13.58□□□□□ -0.24
SLC1A1P43005 TTC39A-204ENST00000371750 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
SLC1A1P43005 ENC1-206ENST00000537006 2024 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
SLC1A1P43005 SLC17A9-202ENST00000370351 3580 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
SLC1A1P43005 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SLC1A1P43005 TSNAXIP1-201ENST00000388833 2429 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
SLC1A1P43005 TSPYL2-201ENST00000375442 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms