Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 CSRP2-203ENST00000547435 632 ntTSL 2 BASIC12.87□□□□□ -0.35
SATB2Q9UPW6 BCDIN3D-AS1-202ENST00000549124 468 ntTSL 3 BASIC12.87□□□□□ -0.35
SATB2Q9UPW6 LINC00677-201ENST00000558224 486 ntTSL 3 BASIC12.87□□□□□ -0.35
SATB2Q9UPW6 AC090282.1-201ENST00000572821 534 ntTSL 3 BASIC12.87□□□□□ -0.35
SATB2Q9UPW6 PCTP-206ENST00000573500 919 ntTSL 3 BASIC12.87□□□□□ -0.35
SATB2Q9UPW6 PACRG-AS3-203ENST00000614038 1246 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SATB2Q9UPW6 Metazoa_SRP.156-201ENST00000622344 262 ntBASIC12.87□□□□□ -0.35
SATB2Q9UPW6 AL499606.1-201ENST00000627866 413 ntTSL 3 BASIC12.87□□□□□ -0.35
SATB2Q9UPW6 FCGR3A-208ENST00000638849 873 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SATB2Q9UPW6 KDM6A-214ENST00000621147 2876 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SATB2Q9UPW6 C19orf12-208ENST00000614091 4489 ntAPPRIS P1 TSL 4 BASIC12.87□□□□□ -0.35
SATB2Q9UPW6 TNRC6C-201ENST00000301624 9632 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
SATB2Q9UPW6 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SATB2Q9UPW6 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SATB2Q9UPW6 SLC35A4-201ENST00000323146 3041 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SATB2Q9UPW6 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SATB2Q9UPW6 DFFB-205ENST00000378209 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SATB2Q9UPW6 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC12.87□□□□□ -0.35
SATB2Q9UPW6 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SATB2Q9UPW6 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SATB2Q9UPW6 STAMBP-204ENST00000409707 1649 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
SATB2Q9UPW6 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SATB2Q9UPW6 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SATB2Q9UPW6 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SATB2Q9UPW6 MCRIP1-212ENST00000576730 2979 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
SATB2Q9UPW6 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SATB2Q9UPW6 GRM1-202ENST00000355289 3874 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SATB2Q9UPW6 SNRPN-205ENST00000400100 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SATB2Q9UPW6 AC008040.5-201ENST00000599781 1781 ntBASIC12.86□□□□□ -0.35
SATB2Q9UPW6 RBM12-202ENST00000374104 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SATB2Q9UPW6 INIP-203ENST00000374242 4233 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SATB2Q9UPW6 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SATB2Q9UPW6 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
SATB2Q9UPW6 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SATB2Q9UPW6 UBTFL8-201ENST00000426903 2112 ntBASIC12.86□□□□□ -0.35
SATB2Q9UPW6 BCL2L13-202ENST00000337612 4905 ntTSL 2 BASIC12.86□□□□□ -0.35
SATB2Q9UPW6 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SATB2Q9UPW6 AADACL4-201ENST00000376221 1575 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
SATB2Q9UPW6 CACNA1F-203ENST00000376265 6070 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SATB2Q9UPW6 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
SATB2Q9UPW6 OSCP1-201ENST00000235532 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SATB2Q9UPW6 OSCP1-203ENST00000356637 1463 ntTSL 5 BASIC12.86□□□□□ -0.35
SATB2Q9UPW6 AC011481.3-201ENST00000623895 5594 ntBASIC12.86□□□□□ -0.35
SATB2Q9UPW6 CLEC10A-206ENST00000576617 1800 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SATB2Q9UPW6 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SATB2Q9UPW6 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SATB2Q9UPW6 TP63-206ENST00000392463 1386 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SATB2Q9UPW6 CA2-201ENST00000285379 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SATB2Q9UPW6 TMEM74B-201ENST00000381894 1730 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SATB2Q9UPW6 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC12.86□□□□□ -0.35
SATB2Q9UPW6 SESN2-201ENST00000253063 3453 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SATB2Q9UPW6 PMM1-201ENST00000216259 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SATB2Q9UPW6 CD79B-203ENST00000392795 1254 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SATB2Q9UPW6 OLA1P2-201ENST00000395519 1264 ntBASIC12.86□□□□□ -0.35
SATB2Q9UPW6 MRPS12-202ENST00000402029 929 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SATB2Q9UPW6 LINC02026-202ENST00000414309 772 ntTSL 3 BASIC12.86□□□□□ -0.35
SATB2Q9UPW6 RN7SL672P-201ENST00000474091 317 ntBASIC12.86□□□□□ -0.35
SATB2Q9UPW6 WWC2-208ENST00000508747 1216 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SATB2Q9UPW6 LY6E-215ENST00000523847 427 ntTSL 3 BASIC12.86□□□□□ -0.35
SATB2Q9UPW6 SAA2-206ENST00000530400 323 ntTSL 3 BASIC12.86□□□□□ -0.35
SATB2Q9UPW6 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC12.86□□□□□ -0.35
SATB2Q9UPW6 MT1X-202ENST00000562939 538 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SATB2Q9UPW6 AC026461.1-201ENST00000567563 551 ntTSL 4 BASIC12.86□□□□□ -0.35
SATB2Q9UPW6 AP003071.1-201ENST00000567925 622 ntTSL 3 BASIC12.86□□□□□ -0.35
SATB2Q9UPW6 AL031710.1-201ENST00000570022 468 ntTSL 2 BASIC12.86□□□□□ -0.35
SATB2Q9UPW6 LINC00514-203ENST00000573465 313 ntTSL 5 BASIC12.86□□□□□ -0.35
SATB2Q9UPW6 INCA1-204ENST00000576820 973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SATB2Q9UPW6 ECSIT-211ENST00000592312 1286 ntTSL 5 BASIC12.86□□□□□ -0.35
SATB2Q9UPW6 AC003070.1-201ENST00000592389 457 ntTSL 2 BASIC12.86□□□□□ -0.35
SATB2Q9UPW6 TMEM230-211ENST00000615008 594 ntTSL 4 BASIC12.86□□□□□ -0.35
SATB2Q9UPW6 HIST1H3B-201ENST00000621411 411 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
SATB2Q9UPW6 CCDC32-215ENST00000625629 801 ntTSL 5 BASIC12.86□□□□□ -0.35
SATB2Q9UPW6 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SATB2Q9UPW6 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SATB2Q9UPW6 AC012531.1-201ENST00000562848 2680 ntBASIC12.86□□□□□ -0.35
SATB2Q9UPW6 HTR2C-201ENST00000276198 4751 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SATB2Q9UPW6 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SATB2Q9UPW6 ZFYVE27-201ENST00000337540 2927 ntTSL 2 BASIC12.86□□□□□ -0.35
SATB2Q9UPW6 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC12.86□□□□□ -0.35
SATB2Q9UPW6 LINC00675-202ENST00000581851 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SATB2Q9UPW6 SYNPO-202ENST00000394243 7063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SATB2Q9UPW6 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SATB2Q9UPW6 EDEM2-201ENST00000374491 1756 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SATB2Q9UPW6 CYTH1-203ENST00000585509 3315 ntTSL 5 BASIC12.86□□□□□ -0.35
SATB2Q9UPW6 AREL1-201ENST00000356357 5456 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SATB2Q9UPW6 ERBB2-201ENST00000269571 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SATB2Q9UPW6 TTYH3-204ENST00000407643 4537 ntTSL 5 BASIC12.86□□□□□ -0.35
SATB2Q9UPW6 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SATB2Q9UPW6 VWC2-201ENST00000340652 11299 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SATB2Q9UPW6 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SATB2Q9UPW6 AC026271.1-201ENST00000447794 1348 ntBASIC12.86□□□□□ -0.35
SATB2Q9UPW6 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SATB2Q9UPW6 ARRB2-218ENST00000575877 1579 ntTSL 5 BASIC12.86□□□□□ -0.35
SATB2Q9UPW6 DMC1-207ENST00000616615 1595 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SATB2Q9UPW6 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
SATB2Q9UPW6 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
SATB2Q9UPW6 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC12.85□□□□□ -0.35
SATB2Q9UPW6 PBX1-203ENST00000420696 6636 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
SATB2Q9UPW6 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SATB2Q9UPW6 AC005014.1-201ENST00000432006 2976 ntBASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms