Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 AKR1B1-201ENST00000285930 1409 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SATB2Q9UPW6 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
SATB2Q9UPW6 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SATB2Q9UPW6 LINC00638-201ENST00000555578 2518 ntBASIC12.9□□□□□ -0.34
SATB2Q9UPW6 CD44-203ENST00000278386 484 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SATB2Q9UPW6 HHLA3-202ENST00000361764 692 ntAPPRIS P3 TSL 2 BASIC12.9□□□□□ -0.34
SATB2Q9UPW6 SLC35A2-203ENST00000376515 1044 ntTSL 3 BASIC12.9□□□□□ -0.34
SATB2Q9UPW6 PPP1R7-205ENST00000404405 1009 ntTSL 3 BASIC12.9□□□□□ -0.34
SATB2Q9UPW6 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC12.9□□□□□ -0.34
SATB2Q9UPW6 HNF1A-AS1-201ENST00000433033 612 ntTSL 3 BASIC12.9□□□□□ -0.34
SATB2Q9UPW6 AC092865.2-201ENST00000439409 971 ntBASIC12.9□□□□□ -0.34
SATB2Q9UPW6 AC005077.3-201ENST00000449614 213 ntBASIC12.9□□□□□ -0.34
SATB2Q9UPW6 AL121894.1-201ENST00000450971 436 ntTSL 2 BASIC12.9□□□□□ -0.34
SATB2Q9UPW6 AC019118.1-201ENST00000454530 435 ntTSL 3 BASIC12.9□□□□□ -0.34
SATB2Q9UPW6 TPT1P6-201ENST00000458298 514 ntBASIC12.9□□□□□ -0.34
SATB2Q9UPW6 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC12.9□□□□□ -0.34
SATB2Q9UPW6 RN7SL838P-201ENST00000481676 295 ntBASIC12.9□□□□□ -0.34
SATB2Q9UPW6 AL162231.1-205ENST00000544078 338 ntAPPRIS P2 TSL 2 BASIC12.9□□□□□ -0.34
SATB2Q9UPW6 KCCAT198-201ENST00000549251 549 ntTSL 4 BASIC12.9□□□□□ -0.34
SATB2Q9UPW6 AC005993.1-201ENST00000555581 397 ntTSL 5 BASIC12.9□□□□□ -0.34
SATB2Q9UPW6 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC12.9□□□□□ -0.34
SATB2Q9UPW6 RN7SL440P-201ENST00000577855 343 ntBASIC12.9□□□□□ -0.34
SATB2Q9UPW6 USE1-207ENST00000596136 637 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SATB2Q9UPW6 Metazoa_SRP.153-201ENST00000620153 341 ntBASIC12.9□□□□□ -0.34
SATB2Q9UPW6 AL353658.2-201ENST00000629794 519 ntTSL 5 BASIC12.9□□□□□ -0.34
SATB2Q9UPW6 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SATB2Q9UPW6 CMC2-201ENST00000219400 10301 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SATB2Q9UPW6 SLC4A1-201ENST00000262418 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SATB2Q9UPW6 ECI2-201ENST00000361538 1380 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SATB2Q9UPW6 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SATB2Q9UPW6 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC12.9□□□□□ -0.34
SATB2Q9UPW6 AL022323.5-201ENST00000624101 2059 ntBASIC12.9□□□□□ -0.34
SATB2Q9UPW6 NKAP-201ENST00000371410 5963 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SATB2Q9UPW6 RCC2P5-201ENST00000492126 1487 ntBASIC12.9□□□□□ -0.34
SATB2Q9UPW6 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC12.9□□□□□ -0.34
SATB2Q9UPW6 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC12.9□□□□□ -0.34
SATB2Q9UPW6 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SATB2Q9UPW6 BAZ2A-201ENST00000379441 8831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
SATB2Q9UPW6 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.35
SATB2Q9UPW6 SUPT20HL1-201ENST00000436466 2618 ntBASIC12.9□□□□□ -0.35
SATB2Q9UPW6 ZSCAN21-203ENST00000456748 1904 ntTSL 5 BASIC12.9□□□□□ -0.35
SATB2Q9UPW6 RAPGEFL1-202ENST00000456989 1582 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
SATB2Q9UPW6 MANEA-AS1-201ENST00000564541 2268 ntBASIC12.9□□□□□ -0.35
SATB2Q9UPW6 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
SATB2Q9UPW6 PCSK2-202ENST00000377899 4674 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SATB2Q9UPW6 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SATB2Q9UPW6 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SATB2Q9UPW6 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SATB2Q9UPW6 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SATB2Q9UPW6 MMP19-202ENST00000409200 1431 ntTSL 2 BASIC12.89□□□□□ -0.35
SATB2Q9UPW6 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SATB2Q9UPW6 DQX1-202ENST00000404568 2689 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
SATB2Q9UPW6 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
SATB2Q9UPW6 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
SATB2Q9UPW6 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
SATB2Q9UPW6 ANXA3-202ENST00000503570 1524 ntTSL 5 BASIC12.89□□□□□ -0.35
SATB2Q9UPW6 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SATB2Q9UPW6 PTGR2-205ENST00000555661 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SATB2Q9UPW6 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC12.89□□□□□ -0.35
SATB2Q9UPW6 DIP2C-205ENST00000634311 4961 ntTSL 5 BASIC12.89□□□□□ -0.35
SATB2Q9UPW6 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SATB2Q9UPW6 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
SATB2Q9UPW6 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
SATB2Q9UPW6 TMEM60-201ENST00000257663 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SATB2Q9UPW6 C18orf21-202ENST00000333234 958 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SATB2Q9UPW6 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SATB2Q9UPW6 LYPLA2-203ENST00000374503 868 ntTSL 2 BASIC12.89□□□□□ -0.35
SATB2Q9UPW6 CDRT15L2-201ENST00000399044 1048 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
SATB2Q9UPW6 INMT-202ENST00000409539 803 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SATB2Q9UPW6 AL359182.1-201ENST00000435915 469 ntTSL 3 BASIC12.89□□□□□ -0.35
SATB2Q9UPW6 CDKN2A-AS1-201ENST00000441769 823 ntBASIC12.89□□□□□ -0.35
SATB2Q9UPW6 AC010900.1-201ENST00000449849 1296 ntBASIC12.89□□□□□ -0.35
SATB2Q9UPW6 ARHGEF26-AS1-203ENST00000480639 582 ntTSL 2 BASIC12.89□□□□□ -0.35
SATB2Q9UPW6 CRYBB2P1-204ENST00000509460 701 ntTSL 3 BASIC12.89□□□□□ -0.35
SATB2Q9UPW6 C5orf63-203ENST00000509733 553 ntTSL 4 BASIC12.89□□□□□ -0.35
SATB2Q9UPW6 AP000640.1-201ENST00000525337 879 ntTSL 2 BASIC12.89□□□□□ -0.35
SATB2Q9UPW6 CTBP2P6-201ENST00000526402 1229 ntBASIC12.89□□□□□ -0.35
SATB2Q9UPW6 AC133555.4-201ENST00000569081 152 ntBASIC12.89□□□□□ -0.35
SATB2Q9UPW6 AIPL1-210ENST00000576307 1077 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SATB2Q9UPW6 CCND3P2-201ENST00000579393 537 ntBASIC12.89□□□□□ -0.35
SATB2Q9UPW6 ITGB2-AS1-204ENST00000609592 482 ntTSL 5 BASIC12.89□□□□□ -0.35
SATB2Q9UPW6 ARFIP2-210ENST00000614314 3846 ntTSL 2 BASIC12.89□□□□□ -0.35
SATB2Q9UPW6 BX322562.1-201ENST00000617004 561 ntBASIC12.89□□□□□ -0.35
SATB2Q9UPW6 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC12.89□□□□□ -0.35
SATB2Q9UPW6 SLC5A11-202ENST00000424767 2399 ntTSL 2 BASIC12.89□□□□□ -0.35
SATB2Q9UPW6 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SATB2Q9UPW6 AC024075.2-201ENST00000598112 1473 ntBASIC12.89□□□□□ -0.35
SATB2Q9UPW6 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC12.89□□□□□ -0.35
SATB2Q9UPW6 KCNJ14-202ENST00000391884 3990 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SATB2Q9UPW6 LINC01658-201ENST00000320372 1578 ntTSL 2 BASIC12.89□□□□□ -0.35
SATB2Q9UPW6 GRM4-206ENST00000544773 2983 ntTSL 2 BASIC12.89□□□□□ -0.35
SATB2Q9UPW6 RAD1-203ENST00000382038 5770 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SATB2Q9UPW6 PLA2G6-202ENST00000335539 3060 ntTSL 5 BASIC12.89□□□□□ -0.35
SATB2Q9UPW6 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
SATB2Q9UPW6 HAUS6-202ENST00000380502 6536 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SATB2Q9UPW6 TCF21-202ENST00000367882 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SATB2Q9UPW6 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SATB2Q9UPW6 KCND1-201ENST00000218176 4437 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SATB2Q9UPW6 MDGA1-207ENST00000505425 3021 ntTSL 5 BASIC12.88□□□□□ -0.35
SATB2Q9UPW6 C4orf33-201ENST00000281146 6170 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms