Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 AC005695.1-201ENST00000574307 5672 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SCN2BO60939 PLEKHA5-203ENST00000429027 4762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SCN2BO60939 ERN2-201ENST00000256797 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
SCN2BO60939 LINC01134-203ENST00000442673 3059 ntTSL 2 BASIC12.38□□□□□ -0.43
SCN2BO60939 AIMP2-201ENST00000223029 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SCN2BO60939 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SCN2BO60939 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC12.38□□□□□ -0.43
SCN2BO60939 MIR324-201ENST00000362183 83 ntBASIC12.38□□□□□ -0.43
SCN2BO60939 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC12.38□□□□□ -0.43
SCN2BO60939 AC092506.1-202ENST00000401022 528 ntBASIC12.38□□□□□ -0.43
SCN2BO60939 SNORA50D-201ENST00000408059 134 ntBASIC12.38□□□□□ -0.43
SCN2BO60939 PSAT1P2-201ENST00000426107 972 ntBASIC12.38□□□□□ -0.43
SCN2BO60939 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SCN2BO60939 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC12.38□□□□□ -0.43
SCN2BO60939 FGFR3P1-201ENST00000449999 601 ntBASIC12.38□□□□□ -0.43
SCN2BO60939 NALT1-202ENST00000450304 437 ntTSL 3 BASIC12.38□□□□□ -0.43
SCN2BO60939 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC12.38□□□□□ -0.43
SCN2BO60939 RN7SL23P-201ENST00000484055 275 ntBASIC12.38□□□□□ -0.43
SCN2BO60939 TPI1-206ENST00000488464 791 ntTSL 5 BASIC12.38□□□□□ -0.43
SCN2BO60939 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC12.38□□□□□ -0.43
SCN2BO60939 AC093826.1-201ENST00000508655 993 ntBASIC12.38□□□□□ -0.43
SCN2BO60939 KRT18P37-201ENST00000520711 1282 ntBASIC12.38□□□□□ -0.43
SCN2BO60939 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC12.38□□□□□ -0.43
SCN2BO60939 AL031713.1-201ENST00000564813 661 ntBASIC12.38□□□□□ -0.43
SCN2BO60939 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC12.38□□□□□ -0.43
SCN2BO60939 AC127496.3-201ENST00000576032 494 ntTSL 3 BASIC12.38□□□□□ -0.43
SCN2BO60939 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
SCN2BO60939 RPSAP67-201ENST00000584105 862 ntBASIC12.38□□□□□ -0.43
SCN2BO60939 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC12.38□□□□□ -0.43
SCN2BO60939 AC026336.4-201ENST00000624565 1050 ntBASIC12.38□□□□□ -0.43
SCN2BO60939 SNORA50D-202ENST00000627561 132 ntBASIC12.38□□□□□ -0.43
SCN2BO60939 LILRB3-203ENST00000391750 2848 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
SCN2BO60939 EVA1A-201ENST00000233712 1815 ntAPPRIS P2 TSL 2 BASIC12.38□□□□□ -0.43
SCN2BO60939 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SCN2BO60939 ZSCAN29-207ENST00000568898 1389 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SCN2BO60939 MROH7-TTC4-201ENST00000414150 5867 ntAPPRIS P5 TSL 2 BASIC12.38□□□□□ -0.43
SCN2BO60939 STXBP5L-201ENST00000273666 9496 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
SCN2BO60939 PAXIP1-AS2-203ENST00000449486 2121 ntTSL 2 BASIC12.38□□□□□ -0.43
SCN2BO60939 NOA1-201ENST00000264230 3415 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SCN2BO60939 DNPEP-220ENST00000523282 1662 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
SCN2BO60939 RDH16-202ENST00000398138 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SCN2BO60939 MAGED2-205ENST00000375060 1798 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
SCN2BO60939 NR1H4-203ENST00000392986 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SCN2BO60939 FOXD2-AS1-201ENST00000445551 2509 ntBASIC12.38□□□□□ -0.43
SCN2BO60939 OTOF-203ENST00000339598 4756 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SCN2BO60939 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
SCN2BO60939 MRO-203ENST00000428869 1966 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
SCN2BO60939 RALGPS2-203ENST00000367634 7512 ntTSL 2 BASIC12.38□□□□□ -0.43
SCN2BO60939 ZNF485-202ENST00000374435 2052 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SCN2BO60939 DAG1-218ENST00000515359 5576 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
SCN2BO60939 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SCN2BO60939 SYNJ2-208ENST00000640338 3959 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SCN2BO60939 SELPLG-203ENST00000550948 2256 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
SCN2BO60939 MYO9B-206ENST00000595618 7623 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SCN2BO60939 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
SCN2BO60939 MVP-201ENST00000357402 2870 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SCN2BO60939 TFG-202ENST00000418917 1716 ntAPPRIS ALT1 TSL 3 BASIC12.37□□□□□ -0.43
SCN2BO60939 OAS1-201ENST00000202917 1816 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SCN2BO60939 FANCA-202ENST00000389301 5451 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
SCN2BO60939 CD36-207ENST00000432207 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SCN2BO60939 TRPC6-201ENST00000344327 4612 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SCN2BO60939 TRIM40-206ENST00000376724 2006 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
SCN2BO60939 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SCN2BO60939 RNF115-202ENST00000582693 9117 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SCN2BO60939 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC12.37□□□□□ -0.43
SCN2BO60939 MGAT4EP-201ENST00000330493 2810 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SCN2BO60939 CA10-202ENST00000442502 2935 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SCN2BO60939 TSGA10-201ENST00000355053 3037 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SCN2BO60939 ZNF407-201ENST00000299687 7948 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
SCN2BO60939 OR1I1-202ENST00000641398 5984 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
SCN2BO60939 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SCN2BO60939 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SCN2BO60939 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SCN2BO60939 DPPA5-201ENST00000370370 679 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SCN2BO60939 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC12.37□□□□□ -0.43
SCN2BO60939 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SCN2BO60939 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC12.37□□□□□ -0.43
SCN2BO60939 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SCN2BO60939 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC12.37□□□□□ -0.43
SCN2BO60939 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC12.37□□□□□ -0.43
SCN2BO60939 CORO1C-203ENST00000421578 1296 ntTSL 2 BASIC12.37□□□□□ -0.43
SCN2BO60939 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC12.37□□□□□ -0.43
SCN2BO60939 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC12.37□□□□□ -0.43
SCN2BO60939 HNRNPA1P56-201ENST00000505767 954 ntBASIC12.37□□□□□ -0.43
SCN2BO60939 RPS23-204ENST00000507980 836 ntTSL 2 BASIC12.37□□□□□ -0.43
SCN2BO60939 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC12.37□□□□□ -0.43
SCN2BO60939 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC12.37□□□□□ -0.43
SCN2BO60939 SLC25A3-206ENST00000547534 556 ntTSL 2 BASIC12.37□□□□□ -0.43
SCN2BO60939 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC12.37□□□□□ -0.43
SCN2BO60939 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
SCN2BO60939 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC12.37□□□□□ -0.43
SCN2BO60939 PRKXP1-201ENST00000561423 1122 ntBASIC12.37□□□□□ -0.43
SCN2BO60939 IGHV3OR16-16-201ENST00000563644 343 ntBASIC12.37□□□□□ -0.43
SCN2BO60939 FAM187B2P-201ENST00000577135 713 ntBASIC12.37□□□□□ -0.43
SCN2BO60939 AC011247.3-201ENST00000603297 438 ntBASIC12.37□□□□□ -0.43
SCN2BO60939 MIR6842-201ENST00000612539 65 ntBASIC12.37□□□□□ -0.43
SCN2BO60939 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
SCN2BO60939 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC12.37□□□□□ -0.43
SCN2BO60939 AC002044.2-201ENST00000624910 970 ntBASIC12.37□□□□□ -0.43
SCN2BO60939 LINC00969-253ENST00000625338 804 ntTSL 5 BASIC12.37□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms