Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
CYP46A1Q9Y6A2 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
CYP46A1Q9Y6A2 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
CYP46A1Q9Y6A2 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC26.08■■□□□ 1.77
CYP46A1Q9Y6A2 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC26.08■■□□□ 1.77
CYP46A1Q9Y6A2 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC26.08■■□□□ 1.77
CYP46A1Q9Y6A2 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
CYP46A1Q9Y6A2 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
CYP46A1Q9Y6A2 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC26.07■■□□□ 1.76
CYP46A1Q9Y6A2 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
CYP46A1Q9Y6A2 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC26.07■■□□□ 1.76
CYP46A1Q9Y6A2 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC26.07■■□□□ 1.76
CYP46A1Q9Y6A2 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC26.07■■□□□ 1.76
CYP46A1Q9Y6A2 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CYP46A1Q9Y6A2 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
CYP46A1Q9Y6A2 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
CYP46A1Q9Y6A2 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CYP46A1Q9Y6A2 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC26.06■■□□□ 1.76
CYP46A1Q9Y6A2 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC26.06■■□□□ 1.76
CYP46A1Q9Y6A2 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC26.06■■□□□ 1.76
CYP46A1Q9Y6A2 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
CYP46A1Q9Y6A2 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC26.06■■□□□ 1.76
CYP46A1Q9Y6A2 GTSE1-AS1-202ENST00000623117 1518 ntBASIC26.06■■□□□ 1.76
CYP46A1Q9Y6A2 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CYP46A1Q9Y6A2 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
CYP46A1Q9Y6A2 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
CYP46A1Q9Y6A2 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CYP46A1Q9Y6A2 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC26.06■■□□□ 1.76
CYP46A1Q9Y6A2 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC26.06■■□□□ 1.76
CYP46A1Q9Y6A2 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
CYP46A1Q9Y6A2 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC26.06■■□□□ 1.76
CYP46A1Q9Y6A2 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
CYP46A1Q9Y6A2 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
CYP46A1Q9Y6A2 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
CYP46A1Q9Y6A2 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC26.05■■□□□ 1.76
CYP46A1Q9Y6A2 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CYP46A1Q9Y6A2 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CYP46A1Q9Y6A2 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC26.05■■□□□ 1.76
CYP46A1Q9Y6A2 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
CYP46A1Q9Y6A2 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CYP46A1Q9Y6A2 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
CYP46A1Q9Y6A2 RASSF1-AS1-201ENST00000629828 790 ntBASIC26.05■■□□□ 1.76
CYP46A1Q9Y6A2 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
CYP46A1Q9Y6A2 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC26.05■■□□□ 1.76
CYP46A1Q9Y6A2 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CYP46A1Q9Y6A2 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CYP46A1Q9Y6A2 AC092053.2-201ENST00000640557 1818 ntBASIC26.04■■□□□ 1.76
CYP46A1Q9Y6A2 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC26.04■■□□□ 1.76
CYP46A1Q9Y6A2 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
CYP46A1Q9Y6A2 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CYP46A1Q9Y6A2 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC26.04■■□□□ 1.76
CYP46A1Q9Y6A2 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CYP46A1Q9Y6A2 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CYP46A1Q9Y6A2 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC26.04■■□□□ 1.76
CYP46A1Q9Y6A2 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CYP46A1Q9Y6A2 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC26.04■■□□□ 1.76
CYP46A1Q9Y6A2 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC26.04■■□□□ 1.76
CYP46A1Q9Y6A2 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC26.04■■□□□ 1.76
CYP46A1Q9Y6A2 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CYP46A1Q9Y6A2 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CYP46A1Q9Y6A2 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
CYP46A1Q9Y6A2 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CYP46A1Q9Y6A2 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CYP46A1Q9Y6A2 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CYP46A1Q9Y6A2 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
CYP46A1Q9Y6A2 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
CYP46A1Q9Y6A2 AC006455.2-201ENST00000429931 906 ntBASIC26.03■■□□□ 1.76
CYP46A1Q9Y6A2 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC26.03■■□□□ 1.76
CYP46A1Q9Y6A2 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC26.03■■□□□ 1.76
CYP46A1Q9Y6A2 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC26.03■■□□□ 1.76
CYP46A1Q9Y6A2 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
CYP46A1Q9Y6A2 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC26.03■■□□□ 1.76
CYP46A1Q9Y6A2 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
CYP46A1Q9Y6A2 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC26.03■■□□□ 1.76
CYP46A1Q9Y6A2 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CYP46A1Q9Y6A2 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC26.02■■□□□ 1.76
CYP46A1Q9Y6A2 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CYP46A1Q9Y6A2 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CYP46A1Q9Y6A2 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CYP46A1Q9Y6A2 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CYP46A1Q9Y6A2 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC26.02■■□□□ 1.76
CYP46A1Q9Y6A2 AC099791.2-201ENST00000605725 427 ntBASIC26.02■■□□□ 1.76
CYP46A1Q9Y6A2 GATM-206ENST00000558336 1522 ntTSL 2 BASIC26.02■■□□□ 1.76
CYP46A1Q9Y6A2 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC26.02■■□□□ 1.76
CYP46A1Q9Y6A2 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC26.02■■□□□ 1.76
CYP46A1Q9Y6A2 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC26.02■■□□□ 1.76
CYP46A1Q9Y6A2 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC26.01■■□□□ 1.75
CYP46A1Q9Y6A2 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
CYP46A1Q9Y6A2 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
CYP46A1Q9Y6A2 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC26.01■■□□□ 1.75
CYP46A1Q9Y6A2 AL356441.2-201ENST00000443009 864 ntBASIC26.01■■□□□ 1.75
CYP46A1Q9Y6A2 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
CYP46A1Q9Y6A2 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC26.01■■□□□ 1.75
CYP46A1Q9Y6A2 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
CYP46A1Q9Y6A2 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
CYP46A1Q9Y6A2 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CYP46A1Q9Y6A2 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC26■■□□□ 1.75
CYP46A1Q9Y6A2 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC26■■□□□ 1.75
CYP46A1Q9Y6A2 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC26■■□□□ 1.75
CYP46A1Q9Y6A2 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms