Protein–RNA interactions for Protein: Q9Y5H9

PCDHA2, Protocadherin alpha-2, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA2Q9Y5H9 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
PCDHA2Q9Y5H9 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHA2Q9Y5H9 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
PCDHA2Q9Y5H9 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHA2Q9Y5H9 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC24.69■■□□□ 1.54
PCDHA2Q9Y5H9 AK1-201ENST00000223836 736 ntTSL 3 BASIC24.69■■□□□ 1.54
PCDHA2Q9Y5H9 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC24.69■■□□□ 1.54
PCDHA2Q9Y5H9 AC104564.3-201ENST00000582367 638 ntBASIC24.69■■□□□ 1.54
PCDHA2Q9Y5H9 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHA2Q9Y5H9 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC24.69■■□□□ 1.54
PCDHA2Q9Y5H9 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC24.69■■□□□ 1.54
PCDHA2Q9Y5H9 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC24.69■■□□□ 1.54
PCDHA2Q9Y5H9 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC24.68■■□□□ 1.54
PCDHA2Q9Y5H9 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHA2Q9Y5H9 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHA2Q9Y5H9 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHA2Q9Y5H9 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC24.68■■□□□ 1.54
PCDHA2Q9Y5H9 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHA2Q9Y5H9 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC24.68■■□□□ 1.54
PCDHA2Q9Y5H9 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHA2Q9Y5H9 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHA2Q9Y5H9 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHA2Q9Y5H9 OR2I1P-207ENST00000453522 948 ntBASIC24.68■■□□□ 1.54
PCDHA2Q9Y5H9 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHA2Q9Y5H9 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC24.68■■□□□ 1.54
PCDHA2Q9Y5H9 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC24.68■■□□□ 1.54
PCDHA2Q9Y5H9 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
PCDHA2Q9Y5H9 GCA-201ENST00000233612 1694 ntTSL 2 BASIC24.68■■□□□ 1.54
PCDHA2Q9Y5H9 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHA2Q9Y5H9 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC24.68■■□□□ 1.54
PCDHA2Q9Y5H9 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC24.68■■□□□ 1.54
PCDHA2Q9Y5H9 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC24.68■■□□□ 1.54
PCDHA2Q9Y5H9 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
PCDHA2Q9Y5H9 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PCDHA2Q9Y5H9 AC012676.1-201ENST00000574705 1949 ntBASIC24.67■■□□□ 1.54
PCDHA2Q9Y5H9 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PCDHA2Q9Y5H9 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PCDHA2Q9Y5H9 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PCDHA2Q9Y5H9 IGHV3-19-201ENST00000521488 291 ntBASIC24.67■■□□□ 1.54
PCDHA2Q9Y5H9 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
PCDHA2Q9Y5H9 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PCDHA2Q9Y5H9 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC24.67■■□□□ 1.54
PCDHA2Q9Y5H9 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PCDHA2Q9Y5H9 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PCDHA2Q9Y5H9 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC24.67■■□□□ 1.54
PCDHA2Q9Y5H9 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC24.67■■□□□ 1.54
PCDHA2Q9Y5H9 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
PCDHA2Q9Y5H9 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PCDHA2Q9Y5H9 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
PCDHA2Q9Y5H9 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PCDHA2Q9Y5H9 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC24.66■■□□□ 1.54
PCDHA2Q9Y5H9 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC24.66■■□□□ 1.54
PCDHA2Q9Y5H9 AC010525.1-201ENST00000585559 441 ntBASIC24.66■■□□□ 1.54
PCDHA2Q9Y5H9 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC24.66■■□□□ 1.54
PCDHA2Q9Y5H9 SP2-202ENST00000613139 908 ntTSL 5 BASIC24.66■■□□□ 1.54
PCDHA2Q9Y5H9 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
PCDHA2Q9Y5H9 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PCDHA2Q9Y5H9 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC24.65■■□□□ 1.54
PCDHA2Q9Y5H9 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC24.65■■□□□ 1.54
PCDHA2Q9Y5H9 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
PCDHA2Q9Y5H9 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PCDHA2Q9Y5H9 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
PCDHA2Q9Y5H9 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC24.64■■□□□ 1.54
PCDHA2Q9Y5H9 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC24.64■■□□□ 1.54
PCDHA2Q9Y5H9 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC24.64■■□□□ 1.54
PCDHA2Q9Y5H9 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC24.64■■□□□ 1.54
PCDHA2Q9Y5H9 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
PCDHA2Q9Y5H9 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
PCDHA2Q9Y5H9 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
PCDHA2Q9Y5H9 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
PCDHA2Q9Y5H9 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
PCDHA2Q9Y5H9 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.53
PCDHA2Q9Y5H9 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC24.64■■□□□ 1.53
PCDHA2Q9Y5H9 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.53
PCDHA2Q9Y5H9 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC24.64■■□□□ 1.53
PCDHA2Q9Y5H9 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC24.64■■□□□ 1.53
PCDHA2Q9Y5H9 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDHA2Q9Y5H9 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
PCDHA2Q9Y5H9 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDHA2Q9Y5H9 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC24.63■■□□□ 1.53
PCDHA2Q9Y5H9 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC24.63■■□□□ 1.53
PCDHA2Q9Y5H9 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDHA2Q9Y5H9 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC24.63■■□□□ 1.53
PCDHA2Q9Y5H9 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC24.63■■□□□ 1.53
PCDHA2Q9Y5H9 GALC-202ENST00000393568 2054 ntTSL 2 BASIC24.63■■□□□ 1.53
PCDHA2Q9Y5H9 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDHA2Q9Y5H9 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDHA2Q9Y5H9 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
PCDHA2Q9Y5H9 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
PCDHA2Q9Y5H9 C1orf229-201ENST00000623686 2258 ntBASIC24.63■■□□□ 1.53
PCDHA2Q9Y5H9 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
PCDHA2Q9Y5H9 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
PCDHA2Q9Y5H9 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHA2Q9Y5H9 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
PCDHA2Q9Y5H9 MIR572-201ENST00000384983 95 ntBASIC24.62■■□□□ 1.53
PCDHA2Q9Y5H9 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHA2Q9Y5H9 AL162430.1-201ENST00000480705 870 ntBASIC24.62■■□□□ 1.53
PCDHA2Q9Y5H9 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHA2Q9Y5H9 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC24.62■■□□□ 1.53
PCDHA2Q9Y5H9 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms