Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHGC4Q9Y5F7 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHGC4Q9Y5F7 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHGC4Q9Y5F7 C1orf229-201ENST00000623686 2258 ntBASIC22.21■■□□□ 1.15
PCDHGC4Q9Y5F7 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHGC4Q9Y5F7 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC22.21■■□□□ 1.15
PCDHGC4Q9Y5F7 AC099791.1-201ENST00000416440 715 ntBASIC22.21■■□□□ 1.15
PCDHGC4Q9Y5F7 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHGC4Q9Y5F7 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHGC4Q9Y5F7 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHGC4Q9Y5F7 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHGC4Q9Y5F7 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHGC4Q9Y5F7 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
PCDHGC4Q9Y5F7 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
PCDHGC4Q9Y5F7 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHGC4Q9Y5F7 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHGC4Q9Y5F7 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHGC4Q9Y5F7 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
PCDHGC4Q9Y5F7 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHGC4Q9Y5F7 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHGC4Q9Y5F7 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
PCDHGC4Q9Y5F7 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHGC4Q9Y5F7 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC22.2■■□□□ 1.14
PCDHGC4Q9Y5F7 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHGC4Q9Y5F7 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHGC4Q9Y5F7 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHGC4Q9Y5F7 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC22.19■■□□□ 1.14
PCDHGC4Q9Y5F7 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC22.19■■□□□ 1.14
PCDHGC4Q9Y5F7 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHGC4Q9Y5F7 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC22.19■■□□□ 1.14
PCDHGC4Q9Y5F7 AC027682.1-201ENST00000562846 899 ntBASIC22.19■■□□□ 1.14
PCDHGC4Q9Y5F7 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHGC4Q9Y5F7 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC22.19■■□□□ 1.14
PCDHGC4Q9Y5F7 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
PCDHGC4Q9Y5F7 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHGC4Q9Y5F7 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC22.19■■□□□ 1.14
PCDHGC4Q9Y5F7 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
PCDHGC4Q9Y5F7 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHGC4Q9Y5F7 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC22.19■■□□□ 1.14
PCDHGC4Q9Y5F7 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHGC4Q9Y5F7 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHGC4Q9Y5F7 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHGC4Q9Y5F7 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHGC4Q9Y5F7 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
PCDHGC4Q9Y5F7 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHGC4Q9Y5F7 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC22.18■■□□□ 1.14
PCDHGC4Q9Y5F7 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHGC4Q9Y5F7 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
PCDHGC4Q9Y5F7 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC22.18■■□□□ 1.14
PCDHGC4Q9Y5F7 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
PCDHGC4Q9Y5F7 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHGC4Q9Y5F7 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHGC4Q9Y5F7 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
PCDHGC4Q9Y5F7 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC22.17■■□□□ 1.14
PCDHGC4Q9Y5F7 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHGC4Q9Y5F7 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHGC4Q9Y5F7 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHGC4Q9Y5F7 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHGC4Q9Y5F7 RASA4CP-201ENST00000424092 1398 ntBASIC22.17■■□□□ 1.14
PCDHGC4Q9Y5F7 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
PCDHGC4Q9Y5F7 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHGC4Q9Y5F7 AC091305.1-201ENST00000479476 895 ntBASIC22.17■■□□□ 1.14
PCDHGC4Q9Y5F7 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC22.17■■□□□ 1.14
PCDHGC4Q9Y5F7 AC126544.1-201ENST00000580842 1059 ntBASIC22.17■■□□□ 1.14
PCDHGC4Q9Y5F7 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHGC4Q9Y5F7 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC22.17■■□□□ 1.14
PCDHGC4Q9Y5F7 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
PCDHGC4Q9Y5F7 EI24-211ENST00000534546 1544 ntTSL 2 BASIC22.16■■□□□ 1.14
PCDHGC4Q9Y5F7 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC22.16■■□□□ 1.14
PCDHGC4Q9Y5F7 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC22.16■■□□□ 1.14
PCDHGC4Q9Y5F7 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
PCDHGC4Q9Y5F7 LINC01960-201ENST00000563759 1884 ntBASIC22.16■■□□□ 1.14
PCDHGC4Q9Y5F7 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHGC4Q9Y5F7 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHGC4Q9Y5F7 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHGC4Q9Y5F7 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHGC4Q9Y5F7 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC22.16■■□□□ 1.14
PCDHGC4Q9Y5F7 CA15P2-201ENST00000611168 834 ntBASIC22.16■■□□□ 1.14
PCDHGC4Q9Y5F7 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHGC4Q9Y5F7 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC22.16■■□□□ 1.14
PCDHGC4Q9Y5F7 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHGC4Q9Y5F7 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC22.16■■□□□ 1.14
PCDHGC4Q9Y5F7 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC22.16■■□□□ 1.14
PCDHGC4Q9Y5F7 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHGC4Q9Y5F7 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
PCDHGC4Q9Y5F7 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHGC4Q9Y5F7 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHGC4Q9Y5F7 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC22.15■■□□□ 1.14
PCDHGC4Q9Y5F7 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
PCDHGC4Q9Y5F7 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC22.15■■□□□ 1.14
PCDHGC4Q9Y5F7 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC22.15■■□□□ 1.14
PCDHGC4Q9Y5F7 HYI-206ENST00000372434 1025 ntTSL 5 BASIC22.15■■□□□ 1.14
PCDHGC4Q9Y5F7 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC22.15■■□□□ 1.14
PCDHGC4Q9Y5F7 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC22.15■■□□□ 1.14
PCDHGC4Q9Y5F7 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
PCDHGC4Q9Y5F7 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHGC4Q9Y5F7 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
PCDHGC4Q9Y5F7 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHGC4Q9Y5F7 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHGC4Q9Y5F7 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC22.15■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms