Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 AC092437.1-201ENST00000624794 1048 ntBASIC23.14■■□□□ 1.29
YIPF1Q9Y548 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC23.14■■□□□ 1.29
YIPF1Q9Y548 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.14■■□□□ 1.29
YIPF1Q9Y548 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
YIPF1Q9Y548 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
YIPF1Q9Y548 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC23.14■■□□□ 1.29
YIPF1Q9Y548 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
YIPF1Q9Y548 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
YIPF1Q9Y548 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
YIPF1Q9Y548 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC23.13■■□□□ 1.29
YIPF1Q9Y548 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
YIPF1Q9Y548 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC23.13■■□□□ 1.29
YIPF1Q9Y548 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
YIPF1Q9Y548 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
YIPF1Q9Y548 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
YIPF1Q9Y548 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC23.12■■□□□ 1.29
YIPF1Q9Y548 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
YIPF1Q9Y548 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
YIPF1Q9Y548 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
YIPF1Q9Y548 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
YIPF1Q9Y548 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
YIPF1Q9Y548 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
YIPF1Q9Y548 AC010141.3-201ENST00000456659 717 ntBASIC23.12■■□□□ 1.29
YIPF1Q9Y548 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC23.12■■□□□ 1.29
YIPF1Q9Y548 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC23.12■■□□□ 1.29
YIPF1Q9Y548 AC087239.1-201ENST00000622671 572 ntBASIC23.12■■□□□ 1.29
YIPF1Q9Y548 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC23.12■■□□□ 1.29
YIPF1Q9Y548 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
YIPF1Q9Y548 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
YIPF1Q9Y548 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC23.12■■□□□ 1.29
YIPF1Q9Y548 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC23.11■■□□□ 1.29
YIPF1Q9Y548 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC23.11■■□□□ 1.29
YIPF1Q9Y548 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
YIPF1Q9Y548 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
YIPF1Q9Y548 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
YIPF1Q9Y548 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
YIPF1Q9Y548 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
YIPF1Q9Y548 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC23.11■■□□□ 1.29
YIPF1Q9Y548 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
YIPF1Q9Y548 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
YIPF1Q9Y548 TPRG1LP1-201ENST00000598702 760 ntBASIC23.11■■□□□ 1.29
YIPF1Q9Y548 AL137784.2-201ENST00000607332 1000 ntBASIC23.11■■□□□ 1.29
YIPF1Q9Y548 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
YIPF1Q9Y548 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
YIPF1Q9Y548 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
YIPF1Q9Y548 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC23.1■■□□□ 1.29
YIPF1Q9Y548 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
YIPF1Q9Y548 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
YIPF1Q9Y548 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
YIPF1Q9Y548 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
YIPF1Q9Y548 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
YIPF1Q9Y548 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
YIPF1Q9Y548 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC23.09■■□□□ 1.29
YIPF1Q9Y548 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC23.09■■□□□ 1.29
YIPF1Q9Y548 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
YIPF1Q9Y548 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
YIPF1Q9Y548 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
YIPF1Q9Y548 GXYLT1P2-201ENST00000433312 1230 ntBASIC23.09■■□□□ 1.29
YIPF1Q9Y548 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC23.09■■□□□ 1.29
YIPF1Q9Y548 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC23.09■■□□□ 1.29
YIPF1Q9Y548 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
YIPF1Q9Y548 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
YIPF1Q9Y548 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
YIPF1Q9Y548 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC23.09■■□□□ 1.29
YIPF1Q9Y548 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
YIPF1Q9Y548 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
YIPF1Q9Y548 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC23.08■■□□□ 1.29
YIPF1Q9Y548 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
YIPF1Q9Y548 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC23.08■■□□□ 1.29
YIPF1Q9Y548 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
YIPF1Q9Y548 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
YIPF1Q9Y548 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC23.08■■□□□ 1.28
YIPF1Q9Y548 ANOS2P-203ENST00000472227 1816 ntBASIC23.08■■□□□ 1.28
YIPF1Q9Y548 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC23.08■■□□□ 1.28
YIPF1Q9Y548 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
YIPF1Q9Y548 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC23.08■■□□□ 1.28
YIPF1Q9Y548 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
YIPF1Q9Y548 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
YIPF1Q9Y548 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
YIPF1Q9Y548 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
YIPF1Q9Y548 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
YIPF1Q9Y548 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
YIPF1Q9Y548 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC23.07■■□□□ 1.28
YIPF1Q9Y548 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
YIPF1Q9Y548 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC23.07■■□□□ 1.28
YIPF1Q9Y548 SMUG1P1-201ENST00000590640 811 ntBASIC23.07■■□□□ 1.28
YIPF1Q9Y548 RARRES2P11-201ENST00000635158 484 ntBASIC23.07■■□□□ 1.28
YIPF1Q9Y548 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC23.07■■□□□ 1.28
YIPF1Q9Y548 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
YIPF1Q9Y548 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
YIPF1Q9Y548 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
YIPF1Q9Y548 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
YIPF1Q9Y548 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC23.06■■□□□ 1.28
YIPF1Q9Y548 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC23.06■■□□□ 1.28
YIPF1Q9Y548 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
YIPF1Q9Y548 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC23.06■■□□□ 1.28
YIPF1Q9Y548 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC23.06■■□□□ 1.28
YIPF1Q9Y548 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC23.06■■□□□ 1.28
YIPF1Q9Y548 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
YIPF1Q9Y548 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms