Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
COPS3Q9UNS2 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
COPS3Q9UNS2 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COPS3Q9UNS2 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COPS3Q9UNS2 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
COPS3Q9UNS2 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
COPS3Q9UNS2 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
COPS3Q9UNS2 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COPS3Q9UNS2 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COPS3Q9UNS2 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.54■□□□□ 0.72
COPS3Q9UNS2 AL031848.2-201ENST00000607670 837 ntBASIC19.54■□□□□ 0.72
COPS3Q9UNS2 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.54■□□□□ 0.72
COPS3Q9UNS2 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
COPS3Q9UNS2 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
COPS3Q9UNS2 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COPS3Q9UNS2 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.54■□□□□ 0.72
COPS3Q9UNS2 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COPS3Q9UNS2 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COPS3Q9UNS2 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
COPS3Q9UNS2 AC005703.6-201ENST00000623265 1329 ntBASIC19.53■□□□□ 0.72
COPS3Q9UNS2 PKD1P6-201ENST00000343738 4769 ntBASIC19.53■□□□□ 0.72
COPS3Q9UNS2 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.53■□□□□ 0.72
COPS3Q9UNS2 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
COPS3Q9UNS2 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COPS3Q9UNS2 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
COPS3Q9UNS2 AL121603.2-201ENST00000557373 2117 ntBASIC19.53■□□□□ 0.72
COPS3Q9UNS2 FBXW4P1-201ENST00000426721 2239 ntBASIC19.53■□□□□ 0.72
COPS3Q9UNS2 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.53■□□□□ 0.72
COPS3Q9UNS2 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COPS3Q9UNS2 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
COPS3Q9UNS2 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
COPS3Q9UNS2 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
COPS3Q9UNS2 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
COPS3Q9UNS2 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.52■□□□□ 0.72
COPS3Q9UNS2 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
COPS3Q9UNS2 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
COPS3Q9UNS2 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.52■□□□□ 0.72
COPS3Q9UNS2 AL137060.1-201ENST00000618151 2648 ntBASIC19.52■□□□□ 0.72
COPS3Q9UNS2 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
COPS3Q9UNS2 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.52■□□□□ 0.72
COPS3Q9UNS2 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
COPS3Q9UNS2 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
COPS3Q9UNS2 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.52■□□□□ 0.72
COPS3Q9UNS2 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.52■□□□□ 0.72
COPS3Q9UNS2 MIR6722-201ENST00000617286 78 ntBASIC19.52■□□□□ 0.72
COPS3Q9UNS2 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
COPS3Q9UNS2 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
COPS3Q9UNS2 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
COPS3Q9UNS2 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.52■□□□□ 0.71
COPS3Q9UNS2 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.71
COPS3Q9UNS2 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
COPS3Q9UNS2 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.51■□□□□ 0.71
COPS3Q9UNS2 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COPS3Q9UNS2 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COPS3Q9UNS2 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COPS3Q9UNS2 AC021242.3-201ENST00000607598 1377 ntBASIC19.51■□□□□ 0.71
COPS3Q9UNS2 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COPS3Q9UNS2 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COPS3Q9UNS2 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COPS3Q9UNS2 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COPS3Q9UNS2 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
COPS3Q9UNS2 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.51■□□□□ 0.71
COPS3Q9UNS2 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.51■□□□□ 0.71
COPS3Q9UNS2 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.51■□□□□ 0.71
COPS3Q9UNS2 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.51■□□□□ 0.71
COPS3Q9UNS2 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COPS3Q9UNS2 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COPS3Q9UNS2 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
COPS3Q9UNS2 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
COPS3Q9UNS2 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
COPS3Q9UNS2 FP325331.1-202ENST00000623531 1380 ntBASIC19.5■□□□□ 0.71
COPS3Q9UNS2 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COPS3Q9UNS2 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.5■□□□□ 0.71
COPS3Q9UNS2 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
COPS3Q9UNS2 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.5■□□□□ 0.71
COPS3Q9UNS2 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
COPS3Q9UNS2 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COPS3Q9UNS2 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COPS3Q9UNS2 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COPS3Q9UNS2 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COPS3Q9UNS2 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COPS3Q9UNS2 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
COPS3Q9UNS2 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
COPS3Q9UNS2 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
COPS3Q9UNS2 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.49■□□□□ 0.71
COPS3Q9UNS2 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COPS3Q9UNS2 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.49■□□□□ 0.71
COPS3Q9UNS2 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.49■□□□□ 0.71
COPS3Q9UNS2 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COPS3Q9UNS2 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.49■□□□□ 0.71
COPS3Q9UNS2 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COPS3Q9UNS2 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COPS3Q9UNS2 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COPS3Q9UNS2 LINC01960-201ENST00000563759 1884 ntBASIC19.48■□□□□ 0.71
COPS3Q9UNS2 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
COPS3Q9UNS2 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
COPS3Q9UNS2 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.48■□□□□ 0.71
COPS3Q9UNS2 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COPS3Q9UNS2 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.48■□□□□ 0.71
COPS3Q9UNS2 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms