Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PCDHA4Q9UN74 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC25.21■■□□□ 1.63
PCDHA4Q9UN74 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
PCDHA4Q9UN74 AC133561.1-201ENST00000568600 2415 ntBASIC25.2■■□□□ 1.62
PCDHA4Q9UN74 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
PCDHA4Q9UN74 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC25.2■■□□□ 1.62
PCDHA4Q9UN74 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC25.2■■□□□ 1.62
PCDHA4Q9UN74 AL031602.1-201ENST00000633169 911 ntBASIC25.2■■□□□ 1.62
PCDHA4Q9UN74 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC25.2■■□□□ 1.62
PCDHA4Q9UN74 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC25.2■■□□□ 1.62
PCDHA4Q9UN74 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC25.2■■□□□ 1.62
PCDHA4Q9UN74 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC25.2■■□□□ 1.62
PCDHA4Q9UN74 AC087742.1-201ENST00000575880 1738 ntBASIC25.2■■□□□ 1.62
PCDHA4Q9UN74 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC25.19■■□□□ 1.62
PCDHA4Q9UN74 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC25.19■■□□□ 1.62
PCDHA4Q9UN74 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC25.19■■□□□ 1.62
PCDHA4Q9UN74 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC25.19■■□□□ 1.62
PCDHA4Q9UN74 AC133561.4-201ENST00000566112 224 ntBASIC25.19■■□□□ 1.62
PCDHA4Q9UN74 AC012676.1-201ENST00000574705 1949 ntBASIC25.19■■□□□ 1.62
PCDHA4Q9UN74 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
PCDHA4Q9UN74 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
PCDHA4Q9UN74 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
PCDHA4Q9UN74 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
PCDHA4Q9UN74 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
PCDHA4Q9UN74 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
PCDHA4Q9UN74 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC25.18■■□□□ 1.62
PCDHA4Q9UN74 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
PCDHA4Q9UN74 EDA-201ENST00000338901 1233 ntBASIC25.18■■□□□ 1.62
PCDHA4Q9UN74 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
PCDHA4Q9UN74 BX842568.3-201ENST00000418104 571 ntBASIC25.18■■□□□ 1.62
PCDHA4Q9UN74 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC25.18■■□□□ 1.62
PCDHA4Q9UN74 RALB-208ENST00000631312 311 ntTSL 5 BASIC25.18■■□□□ 1.62
PCDHA4Q9UN74 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC25.17■■□□□ 1.62
PCDHA4Q9UN74 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
PCDHA4Q9UN74 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC25.17■■□□□ 1.62
PCDHA4Q9UN74 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC25.17■■□□□ 1.62
PCDHA4Q9UN74 AL031432.3-201ENST00000607698 485 ntBASIC25.17■■□□□ 1.62
PCDHA4Q9UN74 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
PCDHA4Q9UN74 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC25.17■■□□□ 1.62
PCDHA4Q9UN74 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
PCDHA4Q9UN74 ESRRAP2-201ENST00000418437 1549 ntBASIC25.17■■□□□ 1.62
PCDHA4Q9UN74 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
PCDHA4Q9UN74 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PCDHA4Q9UN74 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PCDHA4Q9UN74 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
PCDHA4Q9UN74 GRAMD4P4-201ENST00000613563 1115 ntBASIC25.16■■□□□ 1.62
PCDHA4Q9UN74 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC25.16■■□□□ 1.62
PCDHA4Q9UN74 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PCDHA4Q9UN74 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
PCDHA4Q9UN74 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PCDHA4Q9UN74 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC25.15■■□□□ 1.62
PCDHA4Q9UN74 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PCDHA4Q9UN74 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PCDHA4Q9UN74 MTURN-203ENST00000409688 843 ntTSL 2 BASIC25.15■■□□□ 1.62
PCDHA4Q9UN74 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC25.15■■□□□ 1.62
PCDHA4Q9UN74 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
PCDHA4Q9UN74 AC233992.3-201ENST00000607491 485 ntBASIC25.15■■□□□ 1.62
PCDHA4Q9UN74 AL355001.2-201ENST00000620617 1191 ntBASIC25.15■■□□□ 1.62
PCDHA4Q9UN74 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC25.15■■□□□ 1.62
PCDHA4Q9UN74 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PCDHA4Q9UN74 EI24-211ENST00000534546 1544 ntTSL 2 BASIC25.15■■□□□ 1.62
PCDHA4Q9UN74 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
PCDHA4Q9UN74 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
PCDHA4Q9UN74 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC25.14■■□□□ 1.62
PCDHA4Q9UN74 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
PCDHA4Q9UN74 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.62
PCDHA4Q9UN74 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC25.14■■□□□ 1.62
PCDHA4Q9UN74 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC25.14■■□□□ 1.62
PCDHA4Q9UN74 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC25.14■■□□□ 1.62
PCDHA4Q9UN74 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
PCDHA4Q9UN74 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
PCDHA4Q9UN74 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
PCDHA4Q9UN74 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
PCDHA4Q9UN74 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
PCDHA4Q9UN74 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PCDHA4Q9UN74 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
PCDHA4Q9UN74 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC25.13■■□□□ 1.61
PCDHA4Q9UN74 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
PCDHA4Q9UN74 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PCDHA4Q9UN74 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PCDHA4Q9UN74 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
PCDHA4Q9UN74 AP001330.3-201ENST00000520123 633 ntBASIC25.13■■□□□ 1.61
PCDHA4Q9UN74 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.61
PCDHA4Q9UN74 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
PCDHA4Q9UN74 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PCDHA4Q9UN74 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
PCDHA4Q9UN74 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PCDHA4Q9UN74 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC25.12■■□□□ 1.61
PCDHA4Q9UN74 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC25.12■■□□□ 1.61
PCDHA4Q9UN74 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
PCDHA4Q9UN74 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
PCDHA4Q9UN74 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC25.12■■□□□ 1.61
PCDHA4Q9UN74 RBM38-205ENST00000440234 686 ntTSL 2 BASIC25.12■■□□□ 1.61
PCDHA4Q9UN74 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC25.12■■□□□ 1.61
PCDHA4Q9UN74 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC25.12■■□□□ 1.61
PCDHA4Q9UN74 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC25.12■■□□□ 1.61
PCDHA4Q9UN74 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
PCDHA4Q9UN74 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PCDHA4Q9UN74 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PCDHA4Q9UN74 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC25.12■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms