Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
UBQLN1Q9UMX0 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC23.67■■□□□ 1.38
UBQLN1Q9UMX0 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
UBQLN1Q9UMX0 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
UBQLN1Q9UMX0 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
UBQLN1Q9UMX0 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC23.66■■□□□ 1.38
UBQLN1Q9UMX0 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC23.66■■□□□ 1.38
UBQLN1Q9UMX0 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
UBQLN1Q9UMX0 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
UBQLN1Q9UMX0 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC23.66■■□□□ 1.38
UBQLN1Q9UMX0 NME4-202ENST00000382940 766 ntTSL 3 BASIC23.66■■□□□ 1.38
UBQLN1Q9UMX0 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC23.66■■□□□ 1.38
UBQLN1Q9UMX0 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC23.66■■□□□ 1.38
UBQLN1Q9UMX0 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC23.66■■□□□ 1.38
UBQLN1Q9UMX0 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC23.66■■□□□ 1.38
UBQLN1Q9UMX0 NME4-211ENST00000620944 1193 ntTSL 2 BASIC23.66■■□□□ 1.38
UBQLN1Q9UMX0 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
UBQLN1Q9UMX0 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC23.66■■□□□ 1.38
UBQLN1Q9UMX0 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
UBQLN1Q9UMX0 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC23.65■■□□□ 1.38
UBQLN1Q9UMX0 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
UBQLN1Q9UMX0 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
UBQLN1Q9UMX0 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
UBQLN1Q9UMX0 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC23.65■■□□□ 1.38
UBQLN1Q9UMX0 AC010141.3-201ENST00000456659 717 ntBASIC23.65■■□□□ 1.38
UBQLN1Q9UMX0 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC23.65■■□□□ 1.38
UBQLN1Q9UMX0 AC012414.1-201ENST00000556676 535 ntBASIC23.65■■□□□ 1.38
UBQLN1Q9UMX0 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
UBQLN1Q9UMX0 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC23.65■■□□□ 1.38
UBQLN1Q9UMX0 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
UBQLN1Q9UMX0 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
UBQLN1Q9UMX0 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
UBQLN1Q9UMX0 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC23.65■■□□□ 1.38
UBQLN1Q9UMX0 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
UBQLN1Q9UMX0 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
UBQLN1Q9UMX0 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
UBQLN1Q9UMX0 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
UBQLN1Q9UMX0 RARA-203ENST00000394086 2008 ntTSL 2 BASIC23.64■■□□□ 1.38
UBQLN1Q9UMX0 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
UBQLN1Q9UMX0 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC23.64■■□□□ 1.38
UBQLN1Q9UMX0 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
UBQLN1Q9UMX0 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
UBQLN1Q9UMX0 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC23.64■■□□□ 1.37
UBQLN1Q9UMX0 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC23.64■■□□□ 1.37
UBQLN1Q9UMX0 AL354811.1-201ENST00000610286 706 ntBASIC23.64■■□□□ 1.37
UBQLN1Q9UMX0 MIR6821-201ENST00000617625 74 ntBASIC23.64■■□□□ 1.37
UBQLN1Q9UMX0 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC23.64■■□□□ 1.37
UBQLN1Q9UMX0 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
UBQLN1Q9UMX0 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
UBQLN1Q9UMX0 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
UBQLN1Q9UMX0 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC23.63■■□□□ 1.37
UBQLN1Q9UMX0 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
UBQLN1Q9UMX0 AC097381.1-201ENST00000429019 1296 ntBASIC23.63■■□□□ 1.37
UBQLN1Q9UMX0 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC23.63■■□□□ 1.37
UBQLN1Q9UMX0 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC23.63■■□□□ 1.37
UBQLN1Q9UMX0 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC23.63■■□□□ 1.37
UBQLN1Q9UMX0 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
UBQLN1Q9UMX0 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
UBQLN1Q9UMX0 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
UBQLN1Q9UMX0 USP45-205ENST00000472914 1617 ntTSL 5 BASIC23.62■■□□□ 1.37
UBQLN1Q9UMX0 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
UBQLN1Q9UMX0 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
UBQLN1Q9UMX0 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
UBQLN1Q9UMX0 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC23.62■■□□□ 1.37
UBQLN1Q9UMX0 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
UBQLN1Q9UMX0 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
UBQLN1Q9UMX0 SP2-202ENST00000613139 908 ntTSL 5 BASIC23.62■■□□□ 1.37
UBQLN1Q9UMX0 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
UBQLN1Q9UMX0 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
UBQLN1Q9UMX0 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC23.62■■□□□ 1.37
UBQLN1Q9UMX0 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
UBQLN1Q9UMX0 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC23.62■■□□□ 1.37
UBQLN1Q9UMX0 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
UBQLN1Q9UMX0 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC23.61■■□□□ 1.37
UBQLN1Q9UMX0 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC23.61■■□□□ 1.37
UBQLN1Q9UMX0 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC23.61■■□□□ 1.37
UBQLN1Q9UMX0 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
UBQLN1Q9UMX0 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
UBQLN1Q9UMX0 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC23.61■■□□□ 1.37
UBQLN1Q9UMX0 AC105233.4-201ENST00000642045 216 ntBASIC23.61■■□□□ 1.37
UBQLN1Q9UMX0 NFE2L3P1-201ENST00000588207 1959 ntBASIC23.61■■□□□ 1.37
UBQLN1Q9UMX0 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
UBQLN1Q9UMX0 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC23.61■■□□□ 1.37
UBQLN1Q9UMX0 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
UBQLN1Q9UMX0 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
UBQLN1Q9UMX0 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
UBQLN1Q9UMX0 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC23.6■■□□□ 1.37
UBQLN1Q9UMX0 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
UBQLN1Q9UMX0 AC027612.3-201ENST00000413684 1047 ntBASIC23.6■■□□□ 1.37
UBQLN1Q9UMX0 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC23.6■■□□□ 1.37
UBQLN1Q9UMX0 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC23.6■■□□□ 1.37
UBQLN1Q9UMX0 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
UBQLN1Q9UMX0 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC23.59■■□□□ 1.37
UBQLN1Q9UMX0 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
UBQLN1Q9UMX0 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
UBQLN1Q9UMX0 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
UBQLN1Q9UMX0 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
UBQLN1Q9UMX0 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC23.59■■□□□ 1.37
UBQLN1Q9UMX0 MIR6084-201ENST00000622012 110 ntBASIC23.59■■□□□ 1.37
UBQLN1Q9UMX0 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC23.59■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms