Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.58■□□□□ 0.73
CLCF1Q9UBD9 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CLCF1Q9UBD9 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CLCF1Q9UBD9 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CLCF1Q9UBD9 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CLCF1Q9UBD9 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.58■□□□□ 0.72
CLCF1Q9UBD9 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.58■□□□□ 0.72
CLCF1Q9UBD9 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLCF1Q9UBD9 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLCF1Q9UBD9 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC19.57■□□□□ 0.72
CLCF1Q9UBD9 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.57■□□□□ 0.72
CLCF1Q9UBD9 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLCF1Q9UBD9 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLCF1Q9UBD9 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.57■□□□□ 0.72
CLCF1Q9UBD9 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.57■□□□□ 0.72
CLCF1Q9UBD9 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.57■□□□□ 0.72
CLCF1Q9UBD9 AC123595.1-201ENST00000440769 1046 ntBASIC19.57■□□□□ 0.72
CLCF1Q9UBD9 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CLCF1Q9UBD9 AC105233.4-201ENST00000642045 216 ntBASIC19.57■□□□□ 0.72
CLCF1Q9UBD9 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.57■□□□□ 0.72
CLCF1Q9UBD9 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLCF1Q9UBD9 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CLCF1Q9UBD9 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.57■□□□□ 0.72
CLCF1Q9UBD9 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLCF1Q9UBD9 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.57■□□□□ 0.72
CLCF1Q9UBD9 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.56■□□□□ 0.72
CLCF1Q9UBD9 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.56■□□□□ 0.72
CLCF1Q9UBD9 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLCF1Q9UBD9 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLCF1Q9UBD9 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CLCF1Q9UBD9 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.56■□□□□ 0.72
CLCF1Q9UBD9 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLCF1Q9UBD9 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLCF1Q9UBD9 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLCF1Q9UBD9 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLCF1Q9UBD9 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CLCF1Q9UBD9 AL162430.1-201ENST00000480705 870 ntBASIC19.56■□□□□ 0.72
CLCF1Q9UBD9 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.56■□□□□ 0.72
CLCF1Q9UBD9 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CLCF1Q9UBD9 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
CLCF1Q9UBD9 AC093323.1-202ENST00000635031 2045 ntBASIC19.56■□□□□ 0.72
CLCF1Q9UBD9 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLCF1Q9UBD9 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLCF1Q9UBD9 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
CLCF1Q9UBD9 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.55■□□□□ 0.72
CLCF1Q9UBD9 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLCF1Q9UBD9 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CLCF1Q9UBD9 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CLCF1Q9UBD9 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
CLCF1Q9UBD9 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLCF1Q9UBD9 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.55■□□□□ 0.72
CLCF1Q9UBD9 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.55■□□□□ 0.72
CLCF1Q9UBD9 AC087239.1-201ENST00000622671 572 ntBASIC19.55■□□□□ 0.72
CLCF1Q9UBD9 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CLCF1Q9UBD9 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
CLCF1Q9UBD9 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
CLCF1Q9UBD9 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLCF1Q9UBD9 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.54■□□□□ 0.72
CLCF1Q9UBD9 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLCF1Q9UBD9 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.54■□□□□ 0.72
CLCF1Q9UBD9 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.54■□□□□ 0.72
CLCF1Q9UBD9 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
CLCF1Q9UBD9 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.54■□□□□ 0.72
CLCF1Q9UBD9 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLCF1Q9UBD9 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLCF1Q9UBD9 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLCF1Q9UBD9 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.54■□□□□ 0.72
CLCF1Q9UBD9 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.54■□□□□ 0.72
CLCF1Q9UBD9 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.54■□□□□ 0.72
CLCF1Q9UBD9 AC034268.1-201ENST00000441047 882 ntBASIC19.54■□□□□ 0.72
CLCF1Q9UBD9 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.54■□□□□ 0.72
CLCF1Q9UBD9 AC010141.3-201ENST00000456659 717 ntBASIC19.54■□□□□ 0.72
CLCF1Q9UBD9 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.54■□□□□ 0.72
CLCF1Q9UBD9 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.54■□□□□ 0.72
CLCF1Q9UBD9 AC104564.3-201ENST00000582367 638 ntBASIC19.54■□□□□ 0.72
CLCF1Q9UBD9 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CLCF1Q9UBD9 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLCF1Q9UBD9 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CLCF1Q9UBD9 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CLCF1Q9UBD9 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLCF1Q9UBD9 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLCF1Q9UBD9 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CLCF1Q9UBD9 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.53■□□□□ 0.72
CLCF1Q9UBD9 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.53■□□□□ 0.72
CLCF1Q9UBD9 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.53■□□□□ 0.72
CLCF1Q9UBD9 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CLCF1Q9UBD9 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CLCF1Q9UBD9 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.53■□□□□ 0.72
CLCF1Q9UBD9 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLCF1Q9UBD9 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.53■□□□□ 0.72
CLCF1Q9UBD9 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLCF1Q9UBD9 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLCF1Q9UBD9 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLCF1Q9UBD9 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLCF1Q9UBD9 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
CLCF1Q9UBD9 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLCF1Q9UBD9 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CLCF1Q9UBD9 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CLCF1Q9UBD9 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLCF1Q9UBD9 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms