Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHB16Q9NRJ7 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.97■□□□□ 0.63
PCDHB16Q9NRJ7 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHB16Q9NRJ7 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHB16Q9NRJ7 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC18.97■□□□□ 0.63
PCDHB16Q9NRJ7 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHB16Q9NRJ7 AC007375.3-201ENST00000600936 2314 ntBASIC18.97■□□□□ 0.63
PCDHB16Q9NRJ7 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHB16Q9NRJ7 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
PCDHB16Q9NRJ7 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHB16Q9NRJ7 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.97■□□□□ 0.63
PCDHB16Q9NRJ7 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHB16Q9NRJ7 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB16Q9NRJ7 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB16Q9NRJ7 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB16Q9NRJ7 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
PCDHB16Q9NRJ7 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB16Q9NRJ7 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB16Q9NRJ7 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC18.96■□□□□ 0.63
PCDHB16Q9NRJ7 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC18.96■□□□□ 0.63
PCDHB16Q9NRJ7 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB16Q9NRJ7 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB16Q9NRJ7 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB16Q9NRJ7 AC005703.6-201ENST00000623265 1329 ntBASIC18.96■□□□□ 0.63
PCDHB16Q9NRJ7 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB16Q9NRJ7 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB16Q9NRJ7 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB16Q9NRJ7 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB16Q9NRJ7 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.96■□□□□ 0.63
PCDHB16Q9NRJ7 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB16Q9NRJ7 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB16Q9NRJ7 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
PCDHB16Q9NRJ7 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB16Q9NRJ7 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB16Q9NRJ7 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC18.95■□□□□ 0.62
PCDHB16Q9NRJ7 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC18.95■□□□□ 0.62
PCDHB16Q9NRJ7 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB16Q9NRJ7 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB16Q9NRJ7 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB16Q9NRJ7 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.95■□□□□ 0.62
PCDHB16Q9NRJ7 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB16Q9NRJ7 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB16Q9NRJ7 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB16Q9NRJ7 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB16Q9NRJ7 FP325331.1-202ENST00000623531 1380 ntBASIC18.94■□□□□ 0.62
PCDHB16Q9NRJ7 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
PCDHB16Q9NRJ7 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB16Q9NRJ7 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
PCDHB16Q9NRJ7 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB16Q9NRJ7 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
PCDHB16Q9NRJ7 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB16Q9NRJ7 MIR6722-201ENST00000617286 78 ntBASIC18.94■□□□□ 0.62
PCDHB16Q9NRJ7 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.94■□□□□ 0.62
PCDHB16Q9NRJ7 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB16Q9NRJ7 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB16Q9NRJ7 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB16Q9NRJ7 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.94■□□□□ 0.62
PCDHB16Q9NRJ7 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB16Q9NRJ7 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDHB16Q9NRJ7 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.93■□□□□ 0.62
PCDHB16Q9NRJ7 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB16Q9NRJ7 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
PCDHB16Q9NRJ7 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB16Q9NRJ7 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDHB16Q9NRJ7 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB16Q9NRJ7 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDHB16Q9NRJ7 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB16Q9NRJ7 AC103724.3-201ENST00000564481 992 ntBASIC18.93■□□□□ 0.62
PCDHB16Q9NRJ7 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB16Q9NRJ7 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDHB16Q9NRJ7 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDHB16Q9NRJ7 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB16Q9NRJ7 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDHB16Q9NRJ7 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB16Q9NRJ7 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHB16Q9NRJ7 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHB16Q9NRJ7 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.92■□□□□ 0.62
PCDHB16Q9NRJ7 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHB16Q9NRJ7 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHB16Q9NRJ7 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHB16Q9NRJ7 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHB16Q9NRJ7 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHB16Q9NRJ7 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHB16Q9NRJ7 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
PCDHB16Q9NRJ7 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC18.92■□□□□ 0.62
PCDHB16Q9NRJ7 AC103834.1-201ENST00000520383 144 ntBASIC18.92■□□□□ 0.62
PCDHB16Q9NRJ7 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC18.92■□□□□ 0.62
PCDHB16Q9NRJ7 AL031848.2-201ENST00000607670 837 ntBASIC18.92■□□□□ 0.62
PCDHB16Q9NRJ7 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHB16Q9NRJ7 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHB16Q9NRJ7 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHB16Q9NRJ7 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHB16Q9NRJ7 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHB16Q9NRJ7 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHB16Q9NRJ7 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHB16Q9NRJ7 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHB16Q9NRJ7 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHB16Q9NRJ7 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHB16Q9NRJ7 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
PCDHB16Q9NRJ7 COMT-203ENST00000403184 2217 ntTSL 2 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms