Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PRDM9Q9NQV7 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PRDM9Q9NQV7 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PRDM9Q9NQV7 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PRDM9Q9NQV7 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.79■□□□□ 0.92
PRDM9Q9NQV7 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PRDM9Q9NQV7 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
PRDM9Q9NQV7 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PRDM9Q9NQV7 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
PRDM9Q9NQV7 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PRDM9Q9NQV7 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PRDM9Q9NQV7 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PRDM9Q9NQV7 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PRDM9Q9NQV7 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.78■□□□□ 0.92
PRDM9Q9NQV7 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PRDM9Q9NQV7 AP001330.3-201ENST00000520123 633 ntBASIC20.78■□□□□ 0.92
PRDM9Q9NQV7 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
PRDM9Q9NQV7 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.78■□□□□ 0.92
PRDM9Q9NQV7 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
PRDM9Q9NQV7 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PRDM9Q9NQV7 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PRDM9Q9NQV7 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.77■□□□□ 0.92
PRDM9Q9NQV7 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.77■□□□□ 0.92
PRDM9Q9NQV7 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
PRDM9Q9NQV7 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.77■□□□□ 0.92
PRDM9Q9NQV7 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PRDM9Q9NQV7 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.77■□□□□ 0.92
PRDM9Q9NQV7 BX842568.3-201ENST00000418104 571 ntBASIC20.77■□□□□ 0.92
PRDM9Q9NQV7 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
PRDM9Q9NQV7 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.77■□□□□ 0.92
PRDM9Q9NQV7 OR2I1P-207ENST00000453522 948 ntBASIC20.77■□□□□ 0.92
PRDM9Q9NQV7 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.77■□□□□ 0.92
PRDM9Q9NQV7 AF213884.3-201ENST00000563833 479 ntBASIC20.77■□□□□ 0.92
PRDM9Q9NQV7 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
PRDM9Q9NQV7 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
PRDM9Q9NQV7 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PRDM9Q9NQV7 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PRDM9Q9NQV7 AC004687.1-201ENST00000579003 1625 ntBASIC20.76■□□□□ 0.91
PRDM9Q9NQV7 MIR939-201ENST00000401314 82 ntBASIC20.76■□□□□ 0.91
PRDM9Q9NQV7 AC027682.1-201ENST00000562846 899 ntBASIC20.76■□□□□ 0.91
PRDM9Q9NQV7 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.76■□□□□ 0.91
PRDM9Q9NQV7 AC233992.3-201ENST00000607491 485 ntBASIC20.76■□□□□ 0.91
PRDM9Q9NQV7 AL136967.2-201ENST00000623968 743 ntBASIC20.76■□□□□ 0.91
PRDM9Q9NQV7 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PRDM9Q9NQV7 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PRDM9Q9NQV7 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.75■□□□□ 0.91
PRDM9Q9NQV7 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PRDM9Q9NQV7 AC127496.7-201ENST00000625110 1798 ntBASIC20.75■□□□□ 0.91
PRDM9Q9NQV7 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
PRDM9Q9NQV7 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PRDM9Q9NQV7 AC008764.7-201ENST00000593779 1081 ntBASIC20.75■□□□□ 0.91
PRDM9Q9NQV7 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
PRDM9Q9NQV7 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
PRDM9Q9NQV7 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PRDM9Q9NQV7 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PRDM9Q9NQV7 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PRDM9Q9NQV7 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PRDM9Q9NQV7 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PRDM9Q9NQV7 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PRDM9Q9NQV7 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PRDM9Q9NQV7 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PRDM9Q9NQV7 SLC47A1P1-202ENST00000449666 945 ntBASIC20.74■□□□□ 0.91
PRDM9Q9NQV7 AC091305.1-201ENST00000479476 895 ntBASIC20.74■□□□□ 0.91
PRDM9Q9NQV7 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.74■□□□□ 0.91
PRDM9Q9NQV7 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PRDM9Q9NQV7 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.74■□□□□ 0.91
PRDM9Q9NQV7 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PRDM9Q9NQV7 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
PRDM9Q9NQV7 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.73■□□□□ 0.91
PRDM9Q9NQV7 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.73■□□□□ 0.91
PRDM9Q9NQV7 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRDM9Q9NQV7 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
PRDM9Q9NQV7 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PRDM9Q9NQV7 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PRDM9Q9NQV7 AC068587.7-201ENST00000641602 218 ntBASIC20.73■□□□□ 0.91
PRDM9Q9NQV7 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PRDM9Q9NQV7 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PRDM9Q9NQV7 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRDM9Q9NQV7 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRDM9Q9NQV7 AC019069.1-201ENST00000610008 1333 ntBASIC20.73■□□□□ 0.91
PRDM9Q9NQV7 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRDM9Q9NQV7 C9orf163-202ENST00000624034 2573 ntBASIC20.73■□□□□ 0.91
PRDM9Q9NQV7 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.73■□□□□ 0.91
PRDM9Q9NQV7 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PRDM9Q9NQV7 RASA4CP-201ENST00000424092 1398 ntBASIC20.72■□□□□ 0.91
PRDM9Q9NQV7 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PRDM9Q9NQV7 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PRDM9Q9NQV7 AC099791.1-201ENST00000416440 715 ntBASIC20.72■□□□□ 0.91
PRDM9Q9NQV7 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.72■□□□□ 0.91
PRDM9Q9NQV7 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
PRDM9Q9NQV7 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.72■□□□□ 0.91
PRDM9Q9NQV7 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.72■□□□□ 0.91
PRDM9Q9NQV7 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PRDM9Q9NQV7 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PRDM9Q9NQV7 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PRDM9Q9NQV7 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
PRDM9Q9NQV7 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.71■□□□□ 0.91
PRDM9Q9NQV7 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
PRDM9Q9NQV7 C1orf229-201ENST00000623686 2258 ntBASIC20.71■□□□□ 0.91
PRDM9Q9NQV7 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms