Protein–RNA interactions for Protein: Q9N2K0

HERV-H_2q24.3 provirus ancestral Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9N2K0 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Q9N2K0 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Q9N2K0 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Q9N2K0 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.4■□□□□ 0.54
Q9N2K0 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
Q9N2K0 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Q9N2K0 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
Q9N2K0 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Q9N2K0 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Q9N2K0 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Q9N2K0 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Q9N2K0 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Q9N2K0 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
Q9N2K0 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.39■□□□□ 0.53
Q9N2K0 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Q9N2K0 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Q9N2K0 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Q9N2K0 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Q9N2K0 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC18.39■□□□□ 0.53
Q9N2K0 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC18.39■□□□□ 0.53
Q9N2K0 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
Q9N2K0 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Q9N2K0 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Q9N2K0 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Q9N2K0 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Q9N2K0 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Q9N2K0 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Q9N2K0 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Q9N2K0 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Q9N2K0 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Q9N2K0 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Q9N2K0 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Q9N2K0 LINC01960-201ENST00000563759 1884 ntBASIC18.38■□□□□ 0.53
Q9N2K0 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Q9N2K0 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC18.38■□□□□ 0.53
Q9N2K0 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Q9N2K0 PKD1P6-201ENST00000343738 4769 ntBASIC18.38■□□□□ 0.53
Q9N2K0 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Q9N2K0 AC007375.3-201ENST00000600936 2314 ntBASIC18.38■□□□□ 0.53
Q9N2K0 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
Q9N2K0 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Q9N2K0 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Q9N2K0 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.37■□□□□ 0.53
Q9N2K0 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.37■□□□□ 0.53
Q9N2K0 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Q9N2K0 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Q9N2K0 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Q9N2K0 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.37■□□□□ 0.53
Q9N2K0 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Q9N2K0 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
Q9N2K0 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Q9N2K0 PRTG-204ENST00000561292 833 ntTSL 3 BASIC18.37■□□□□ 0.53
Q9N2K0 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Q9N2K0 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Q9N2K0 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Q9N2K0 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Q9N2K0 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Q9N2K0 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Q9N2K0 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Q9N2K0 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
Q9N2K0 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Q9N2K0 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC18.36■□□□□ 0.53
Q9N2K0 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
Q9N2K0 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC18.36■□□□□ 0.53
Q9N2K0 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC18.36■□□□□ 0.53
Q9N2K0 AC092028.1-203ENST00000608262 953 ntBASIC18.36■□□□□ 0.53
Q9N2K0 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC18.36■□□□□ 0.53
Q9N2K0 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Q9N2K0 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Q9N2K0 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Q9N2K0 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Q9N2K0 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.35■□□□□ 0.53
Q9N2K0 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Q9N2K0 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.35■□□□□ 0.53
Q9N2K0 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.35■□□□□ 0.53
Q9N2K0 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.35■□□□□ 0.53
Q9N2K0 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Q9N2K0 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Q9N2K0 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Q9N2K0 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Q9N2K0 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
Q9N2K0 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Q9N2K0 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Q9N2K0 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Q9N2K0 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Q9N2K0 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.34■□□□□ 0.53
Q9N2K0 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Q9N2K0 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC18.34■□□□□ 0.53
Q9N2K0 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.34■□□□□ 0.53
Q9N2K0 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Q9N2K0 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Q9N2K0 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Q9N2K0 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Q9N2K0 FBXW4P1-201ENST00000426721 2239 ntBASIC18.34■□□□□ 0.53
Q9N2K0 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.34■□□□□ 0.53
Q9N2K0 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Q9N2K0 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Q9N2K0 AC009102.2-201ENST00000606772 1639 ntBASIC18.34■□□□□ 0.53
Q9N2K0 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.34■□□□□ 0.53
Q9N2K0 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 10.4 ms