Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
NEUROD4Q9HD90 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.71■□□□□ 0.91
NEUROD4Q9HD90 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.71■□□□□ 0.91
NEUROD4Q9HD90 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NEUROD4Q9HD90 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.71■□□□□ 0.91
NEUROD4Q9HD90 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NEUROD4Q9HD90 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NEUROD4Q9HD90 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NEUROD4Q9HD90 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.71■□□□□ 0.91
NEUROD4Q9HD90 AC004687.1-201ENST00000579003 1625 ntBASIC20.71■□□□□ 0.91
NEUROD4Q9HD90 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
NEUROD4Q9HD90 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NEUROD4Q9HD90 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.7■□□□□ 0.9
NEUROD4Q9HD90 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NEUROD4Q9HD90 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
NEUROD4Q9HD90 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
NEUROD4Q9HD90 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
NEUROD4Q9HD90 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NEUROD4Q9HD90 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.7■□□□□ 0.9
NEUROD4Q9HD90 AC241377.3-202ENST00000626088 1088 ntBASIC20.7■□□□□ 0.9
NEUROD4Q9HD90 AC241585.3-202ENST00000628937 1088 ntBASIC20.7■□□□□ 0.9
NEUROD4Q9HD90 AC245100.8-202ENST00000629247 1058 ntBASIC20.7■□□□□ 0.9
NEUROD4Q9HD90 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NEUROD4Q9HD90 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NEUROD4Q9HD90 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
NEUROD4Q9HD90 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
NEUROD4Q9HD90 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NEUROD4Q9HD90 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NEUROD4Q9HD90 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NEUROD4Q9HD90 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
NEUROD4Q9HD90 AC139530.1-201ENST00000575312 1977 ntBASIC20.69■□□□□ 0.9
NEUROD4Q9HD90 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NEUROD4Q9HD90 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
NEUROD4Q9HD90 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.69■□□□□ 0.9
NEUROD4Q9HD90 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NEUROD4Q9HD90 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NEUROD4Q9HD90 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NEUROD4Q9HD90 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
NEUROD4Q9HD90 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NEUROD4Q9HD90 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
NEUROD4Q9HD90 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NEUROD4Q9HD90 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
NEUROD4Q9HD90 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
NEUROD4Q9HD90 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
NEUROD4Q9HD90 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.68■□□□□ 0.9
NEUROD4Q9HD90 AL499627.2-201ENST00000606283 725 ntBASIC20.68■□□□□ 0.9
NEUROD4Q9HD90 AC092053.2-201ENST00000640557 1818 ntBASIC20.68■□□□□ 0.9
NEUROD4Q9HD90 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NEUROD4Q9HD90 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NEUROD4Q9HD90 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.68■□□□□ 0.9
NEUROD4Q9HD90 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NEUROD4Q9HD90 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NEUROD4Q9HD90 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
NEUROD4Q9HD90 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NEUROD4Q9HD90 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
NEUROD4Q9HD90 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NEUROD4Q9HD90 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
NEUROD4Q9HD90 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
NEUROD4Q9HD90 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
NEUROD4Q9HD90 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.67■□□□□ 0.9
NEUROD4Q9HD90 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NEUROD4Q9HD90 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.67■□□□□ 0.9
NEUROD4Q9HD90 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NEUROD4Q9HD90 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NEUROD4Q9HD90 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
NEUROD4Q9HD90 AC080038.3-201ENST00000623346 1952 ntBASIC20.66■□□□□ 0.9
NEUROD4Q9HD90 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NEUROD4Q9HD90 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NEUROD4Q9HD90 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NEUROD4Q9HD90 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
NEUROD4Q9HD90 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NEUROD4Q9HD90 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NEUROD4Q9HD90 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NEUROD4Q9HD90 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.66■□□□□ 0.9
NEUROD4Q9HD90 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
NEUROD4Q9HD90 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.66■□□□□ 0.9
NEUROD4Q9HD90 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.66■□□□□ 0.9
NEUROD4Q9HD90 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NEUROD4Q9HD90 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NEUROD4Q9HD90 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.65■□□□□ 0.9
NEUROD4Q9HD90 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
NEUROD4Q9HD90 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
NEUROD4Q9HD90 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NEUROD4Q9HD90 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NEUROD4Q9HD90 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.65■□□□□ 0.9
NEUROD4Q9HD90 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
NEUROD4Q9HD90 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NEUROD4Q9HD90 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NEUROD4Q9HD90 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.65■□□□□ 0.9
NEUROD4Q9HD90 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NEUROD4Q9HD90 AL356740.2-201ENST00000601559 647 ntBASIC20.65■□□□□ 0.9
NEUROD4Q9HD90 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.65■□□□□ 0.9
NEUROD4Q9HD90 LINC00565-201ENST00000562710 2331 ntBASIC20.65■□□□□ 0.9
NEUROD4Q9HD90 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
NEUROD4Q9HD90 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.65■□□□□ 0.9
NEUROD4Q9HD90 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
NEUROD4Q9HD90 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
NEUROD4Q9HD90 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
NEUROD4Q9HD90 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
NEUROD4Q9HD90 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms