Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHD8Q9HCK8 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC20.86■□□□□ 0.93
CHD8Q9HCK8 AC104187.1-201ENST00000607510 612 ntBASIC20.86■□□□□ 0.93
CHD8Q9HCK8 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CHD8Q9HCK8 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.86■□□□□ 0.93
CHD8Q9HCK8 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHD8Q9HCK8 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CHD8Q9HCK8 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.86■□□□□ 0.93
CHD8Q9HCK8 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CHD8Q9HCK8 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.86■□□□□ 0.93
CHD8Q9HCK8 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.86■□□□□ 0.93
CHD8Q9HCK8 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHD8Q9HCK8 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.85■□□□□ 0.93
CHD8Q9HCK8 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.85■□□□□ 0.93
CHD8Q9HCK8 KRT87P-202ENST00000534226 1464 ntBASIC20.85■□□□□ 0.93
CHD8Q9HCK8 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHD8Q9HCK8 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHD8Q9HCK8 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CHD8Q9HCK8 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20.85■□□□□ 0.93
CHD8Q9HCK8 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.85■□□□□ 0.93
CHD8Q9HCK8 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHD8Q9HCK8 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CHD8Q9HCK8 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.84■□□□□ 0.93
CHD8Q9HCK8 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CHD8Q9HCK8 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CHD8Q9HCK8 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
CHD8Q9HCK8 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHD8Q9HCK8 MIR718-201ENST00000390190 70 ntBASIC20.84■□□□□ 0.93
CHD8Q9HCK8 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHD8Q9HCK8 UNC93B5-201ENST00000530315 699 ntBASIC20.84■□□□□ 0.93
CHD8Q9HCK8 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.84■□□□□ 0.93
CHD8Q9HCK8 MYCNOS-205ENST00000641950 531 ntBASIC20.84■□□□□ 0.93
CHD8Q9HCK8 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CHD8Q9HCK8 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CHD8Q9HCK8 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CHD8Q9HCK8 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHD8Q9HCK8 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
CHD8Q9HCK8 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
CHD8Q9HCK8 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.83■□□□□ 0.93
CHD8Q9HCK8 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.83■□□□□ 0.93
CHD8Q9HCK8 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CHD8Q9HCK8 AC073648.6-201ENST00000641589 218 ntBASIC20.83■□□□□ 0.93
CHD8Q9HCK8 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CHD8Q9HCK8 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CHD8Q9HCK8 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CHD8Q9HCK8 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CHD8Q9HCK8 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.83■□□□□ 0.92
CHD8Q9HCK8 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CHD8Q9HCK8 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHD8Q9HCK8 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CHD8Q9HCK8 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHD8Q9HCK8 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
CHD8Q9HCK8 AC079140.4-201ENST00000507448 529 ntBASIC20.82■□□□□ 0.92
CHD8Q9HCK8 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.82■□□□□ 0.92
CHD8Q9HCK8 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.82■□□□□ 0.92
CHD8Q9HCK8 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CHD8Q9HCK8 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.82■□□□□ 0.92
CHD8Q9HCK8 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.82■□□□□ 0.92
CHD8Q9HCK8 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
CHD8Q9HCK8 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CHD8Q9HCK8 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CHD8Q9HCK8 MYC-209ENST00000641252 345 ntBASIC20.82■□□□□ 0.92
CHD8Q9HCK8 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.81■□□□□ 0.92
CHD8Q9HCK8 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC20.81■□□□□ 0.92
CHD8Q9HCK8 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.81■□□□□ 0.92
CHD8Q9HCK8 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CHD8Q9HCK8 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.81■□□□□ 0.92
CHD8Q9HCK8 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHD8Q9HCK8 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHD8Q9HCK8 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.81■□□□□ 0.92
CHD8Q9HCK8 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
CHD8Q9HCK8 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHD8Q9HCK8 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.81■□□□□ 0.92
CHD8Q9HCK8 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.81■□□□□ 0.92
CHD8Q9HCK8 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.81■□□□□ 0.92
CHD8Q9HCK8 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CHD8Q9HCK8 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHD8Q9HCK8 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.81■□□□□ 0.92
CHD8Q9HCK8 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC20.8■□□□□ 0.92
CHD8Q9HCK8 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.8■□□□□ 0.92
CHD8Q9HCK8 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHD8Q9HCK8 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHD8Q9HCK8 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHD8Q9HCK8 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
CHD8Q9HCK8 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHD8Q9HCK8 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.8■□□□□ 0.92
CHD8Q9HCK8 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.8■□□□□ 0.92
CHD8Q9HCK8 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.8■□□□□ 0.92
CHD8Q9HCK8 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.8■□□□□ 0.92
CHD8Q9HCK8 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CHD8Q9HCK8 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHD8Q9HCK8 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHD8Q9HCK8 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CHD8Q9HCK8 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
CHD8Q9HCK8 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHD8Q9HCK8 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
CHD8Q9HCK8 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.79■□□□□ 0.92
CHD8Q9HCK8 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.79■□□□□ 0.92
CHD8Q9HCK8 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHD8Q9HCK8 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms