Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC25.44■■□□□ 1.66
ZFYVE28Q9HCC9 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
ZFYVE28Q9HCC9 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
ZFYVE28Q9HCC9 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
ZFYVE28Q9HCC9 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
ZFYVE28Q9HCC9 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC25.43■■□□□ 1.66
ZFYVE28Q9HCC9 KLF13-207ENST00000560473 489 ntTSL 3 BASIC25.43■■□□□ 1.66
ZFYVE28Q9HCC9 AC087239.1-201ENST00000622671 572 ntBASIC25.43■■□□□ 1.66
ZFYVE28Q9HCC9 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC25.43■■□□□ 1.66
ZFYVE28Q9HCC9 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC25.43■■□□□ 1.66
ZFYVE28Q9HCC9 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
ZFYVE28Q9HCC9 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
ZFYVE28Q9HCC9 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC25.42■■□□□ 1.66
ZFYVE28Q9HCC9 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC25.42■■□□□ 1.66
ZFYVE28Q9HCC9 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC25.42■■□□□ 1.66
ZFYVE28Q9HCC9 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC25.41■■□□□ 1.66
ZFYVE28Q9HCC9 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC25.41■■□□□ 1.66
ZFYVE28Q9HCC9 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC25.41■■□□□ 1.66
ZFYVE28Q9HCC9 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC25.41■■□□□ 1.66
ZFYVE28Q9HCC9 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
ZFYVE28Q9HCC9 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC25.41■■□□□ 1.66
ZFYVE28Q9HCC9 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
ZFYVE28Q9HCC9 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC25.41■■□□□ 1.66
ZFYVE28Q9HCC9 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC25.41■■□□□ 1.66
ZFYVE28Q9HCC9 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC25.41■■□□□ 1.66
ZFYVE28Q9HCC9 TFG-210ENST00000620299 1289 ntTSL 5 BASIC25.41■■□□□ 1.66
ZFYVE28Q9HCC9 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC25.41■■□□□ 1.66
ZFYVE28Q9HCC9 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC25.41■■□□□ 1.66
ZFYVE28Q9HCC9 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
ZFYVE28Q9HCC9 AC145676.1-201ENST00000514988 2004 ntBASIC25.41■■□□□ 1.66
ZFYVE28Q9HCC9 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC25.4■■□□□ 1.66
ZFYVE28Q9HCC9 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
ZFYVE28Q9HCC9 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
ZFYVE28Q9HCC9 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
ZFYVE28Q9HCC9 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
ZFYVE28Q9HCC9 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
ZFYVE28Q9HCC9 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
ZFYVE28Q9HCC9 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
ZFYVE28Q9HCC9 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC25.4■■□□□ 1.66
ZFYVE28Q9HCC9 AC010141.3-201ENST00000456659 717 ntBASIC25.4■■□□□ 1.66
ZFYVE28Q9HCC9 FAM201B-201ENST00000458407 597 ntBASIC25.4■■□□□ 1.66
ZFYVE28Q9HCC9 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC25.4■■□□□ 1.66
ZFYVE28Q9HCC9 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC25.4■■□□□ 1.66
ZFYVE28Q9HCC9 SLC7A5P2-201ENST00000553010 536 ntBASIC25.4■■□□□ 1.66
ZFYVE28Q9HCC9 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC25.4■■□□□ 1.66
ZFYVE28Q9HCC9 RGMA-211ENST00000557420 989 ntTSL 3 BASIC25.4■■□□□ 1.66
ZFYVE28Q9HCC9 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC25.4■■□□□ 1.66
ZFYVE28Q9HCC9 EI24-211ENST00000534546 1544 ntTSL 2 BASIC25.4■■□□□ 1.66
ZFYVE28Q9HCC9 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC25.39■■□□□ 1.66
ZFYVE28Q9HCC9 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC25.39■■□□□ 1.66
ZFYVE28Q9HCC9 SLC29A4P1-201ENST00000398760 971 ntBASIC25.39■■□□□ 1.66
ZFYVE28Q9HCC9 AC007322.1-201ENST00000426983 750 ntBASIC25.39■■□□□ 1.66
ZFYVE28Q9HCC9 GUSBP6-202ENST00000438529 1198 ntBASIC25.39■■□□□ 1.66
ZFYVE28Q9HCC9 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC25.39■■□□□ 1.66
ZFYVE28Q9HCC9 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
ZFYVE28Q9HCC9 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.66
ZFYVE28Q9HCC9 AC005181.1-201ENST00000604782 1256 ntBASIC25.39■■□□□ 1.66
ZFYVE28Q9HCC9 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC25.39■■□□□ 1.66
ZFYVE28Q9HCC9 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
ZFYVE28Q9HCC9 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC25.39■■□□□ 1.65
ZFYVE28Q9HCC9 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
ZFYVE28Q9HCC9 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
ZFYVE28Q9HCC9 EI24-213ENST00000618552 1747 ntTSL 5 BASIC25.38■■□□□ 1.65
ZFYVE28Q9HCC9 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC25.38■■□□□ 1.65
ZFYVE28Q9HCC9 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
ZFYVE28Q9HCC9 METTL15-202ENST00000403099 795 ntTSL 5 BASIC25.38■■□□□ 1.65
ZFYVE28Q9HCC9 OAS3-207ENST00000551007 998 ntTSL 2 BASIC25.38■■□□□ 1.65
ZFYVE28Q9HCC9 AL138781.1-201ENST00000566567 1274 ntBASIC25.38■■□□□ 1.65
ZFYVE28Q9HCC9 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC25.38■■□□□ 1.65
ZFYVE28Q9HCC9 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
ZFYVE28Q9HCC9 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC25.38■■□□□ 1.65
ZFYVE28Q9HCC9 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
ZFYVE28Q9HCC9 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
ZFYVE28Q9HCC9 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
ZFYVE28Q9HCC9 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
ZFYVE28Q9HCC9 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
ZFYVE28Q9HCC9 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC25.37■■□□□ 1.65
ZFYVE28Q9HCC9 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
ZFYVE28Q9HCC9 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
ZFYVE28Q9HCC9 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
ZFYVE28Q9HCC9 MIR4651-201ENST00000582622 73 ntBASIC25.37■■□□□ 1.65
ZFYVE28Q9HCC9 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC25.37■■□□□ 1.65
ZFYVE28Q9HCC9 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC25.37■■□□□ 1.65
ZFYVE28Q9HCC9 PFKL-212ENST00000628044 129 ntTSL 3 BASIC25.37■■□□□ 1.65
ZFYVE28Q9HCC9 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
ZFYVE28Q9HCC9 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
ZFYVE28Q9HCC9 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
ZFYVE28Q9HCC9 AC135731.1-201ENST00000569415 2548 ntBASIC25.36■■□□□ 1.65
ZFYVE28Q9HCC9 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
ZFYVE28Q9HCC9 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC25.36■■□□□ 1.65
ZFYVE28Q9HCC9 DUX4L16-201ENST00000555130 1264 ntBASIC25.36■■□□□ 1.65
ZFYVE28Q9HCC9 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC25.36■■□□□ 1.65
ZFYVE28Q9HCC9 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
ZFYVE28Q9HCC9 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
ZFYVE28Q9HCC9 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
ZFYVE28Q9HCC9 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
ZFYVE28Q9HCC9 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
ZFYVE28Q9HCC9 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC25.35■■□□□ 1.65
ZFYVE28Q9HCC9 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
ZFYVE28Q9HCC9 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC25.35■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms