Protein–RNA interactions for Protein: Q9H9Z2

LIN28A, Protein lin-28 homolog A, humanhuman

Known RBP Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28AQ9H9Z2 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LIN28AQ9H9Z2 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LIN28AQ9H9Z2 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LIN28AQ9H9Z2 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
LIN28AQ9H9Z2 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.01■□□□□ 0.95
LIN28AQ9H9Z2 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LIN28AQ9H9Z2 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
LIN28AQ9H9Z2 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
LIN28AQ9H9Z2 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LIN28AQ9H9Z2 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LIN28AQ9H9Z2 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.01■□□□□ 0.95
LIN28AQ9H9Z2 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LIN28AQ9H9Z2 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
LIN28AQ9H9Z2 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LIN28AQ9H9Z2 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21■□□□□ 0.95
LIN28AQ9H9Z2 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21■□□□□ 0.95
LIN28AQ9H9Z2 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
LIN28AQ9H9Z2 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21■□□□□ 0.95
LIN28AQ9H9Z2 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
LIN28AQ9H9Z2 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21■□□□□ 0.95
LIN28AQ9H9Z2 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LIN28AQ9H9Z2 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21■□□□□ 0.95
LIN28AQ9H9Z2 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21■□□□□ 0.95
LIN28AQ9H9Z2 ECEL1P1-201ENST00000373592 1742 ntBASIC21■□□□□ 0.95
LIN28AQ9H9Z2 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21■□□□□ 0.95
LIN28AQ9H9Z2 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21■□□□□ 0.95
LIN28AQ9H9Z2 AC009102.2-201ENST00000606772 1639 ntBASIC21■□□□□ 0.95
LIN28AQ9H9Z2 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
LIN28AQ9H9Z2 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
LIN28AQ9H9Z2 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
LIN28AQ9H9Z2 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LIN28AQ9H9Z2 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LIN28AQ9H9Z2 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
LIN28AQ9H9Z2 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LIN28AQ9H9Z2 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.99■□□□□ 0.95
LIN28AQ9H9Z2 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LIN28AQ9H9Z2 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LIN28AQ9H9Z2 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LIN28AQ9H9Z2 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
LIN28AQ9H9Z2 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
LIN28AQ9H9Z2 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LIN28AQ9H9Z2 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
LIN28AQ9H9Z2 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
LIN28AQ9H9Z2 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LIN28AQ9H9Z2 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
LIN28AQ9H9Z2 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LIN28AQ9H9Z2 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
LIN28AQ9H9Z2 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LIN28AQ9H9Z2 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.98■□□□□ 0.95
LIN28AQ9H9Z2 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.97■□□□□ 0.95
LIN28AQ9H9Z2 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.97■□□□□ 0.95
LIN28AQ9H9Z2 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.97■□□□□ 0.95
LIN28AQ9H9Z2 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LIN28AQ9H9Z2 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.97■□□□□ 0.95
LIN28AQ9H9Z2 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
LIN28AQ9H9Z2 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LIN28AQ9H9Z2 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
LIN28AQ9H9Z2 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LIN28AQ9H9Z2 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.97■□□□□ 0.95
LIN28AQ9H9Z2 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LIN28AQ9H9Z2 AL121603.2-201ENST00000557373 2117 ntBASIC20.97■□□□□ 0.95
LIN28AQ9H9Z2 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.97■□□□□ 0.95
LIN28AQ9H9Z2 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LIN28AQ9H9Z2 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
LIN28AQ9H9Z2 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
LIN28AQ9H9Z2 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
LIN28AQ9H9Z2 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
LIN28AQ9H9Z2 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LIN28AQ9H9Z2 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
LIN28AQ9H9Z2 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
LIN28AQ9H9Z2 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
LIN28AQ9H9Z2 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LIN28AQ9H9Z2 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
LIN28AQ9H9Z2 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LIN28AQ9H9Z2 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.96■□□□□ 0.95
LIN28AQ9H9Z2 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
LIN28AQ9H9Z2 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
LIN28AQ9H9Z2 RNF165-205ENST00000588679 2904 ntBASIC20.96■□□□□ 0.95
LIN28AQ9H9Z2 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
LIN28AQ9H9Z2 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LIN28AQ9H9Z2 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
LIN28AQ9H9Z2 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LIN28AQ9H9Z2 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
LIN28AQ9H9Z2 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
LIN28AQ9H9Z2 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LIN28AQ9H9Z2 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LIN28AQ9H9Z2 SRD5A1P1-201ENST00000442297 786 ntBASIC20.95■□□□□ 0.94
LIN28AQ9H9Z2 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
LIN28AQ9H9Z2 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.95■□□□□ 0.94
LIN28AQ9H9Z2 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.95■□□□□ 0.94
LIN28AQ9H9Z2 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.95■□□□□ 0.94
LIN28AQ9H9Z2 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.95■□□□□ 0.94
LIN28AQ9H9Z2 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LIN28AQ9H9Z2 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LIN28AQ9H9Z2 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.94■□□□□ 0.94
LIN28AQ9H9Z2 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LIN28AQ9H9Z2 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
LIN28AQ9H9Z2 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LIN28AQ9H9Z2 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
LIN28AQ9H9Z2 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms