Protein–RNA interactions for Protein: Q9H5U6

ZCCHC4, Zinc finger CCHC domain-containing protein 4, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC4Q9H5U6 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZCCHC4Q9H5U6 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZCCHC4Q9H5U6 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZCCHC4Q9H5U6 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ZCCHC4Q9H5U6 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ZCCHC4Q9H5U6 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZCCHC4Q9H5U6 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.27■□□□□ 0.68
ZCCHC4Q9H5U6 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZCCHC4Q9H5U6 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZCCHC4Q9H5U6 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.27■□□□□ 0.68
ZCCHC4Q9H5U6 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ZCCHC4Q9H5U6 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZCCHC4Q9H5U6 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZCCHC4Q9H5U6 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZCCHC4Q9H5U6 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC19.27■□□□□ 0.68
ZCCHC4Q9H5U6 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.27■□□□□ 0.68
ZCCHC4Q9H5U6 SNX5-217ENST00000606557 1087 ntBASIC19.27■□□□□ 0.68
ZCCHC4Q9H5U6 AC012354.3-201ENST00000623734 483 ntBASIC19.27■□□□□ 0.68
ZCCHC4Q9H5U6 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.27■□□□□ 0.68
ZCCHC4Q9H5U6 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ZCCHC4Q9H5U6 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
ZCCHC4Q9H5U6 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
ZCCHC4Q9H5U6 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
ZCCHC4Q9H5U6 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
ZCCHC4Q9H5U6 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZCCHC4Q9H5U6 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZCCHC4Q9H5U6 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZCCHC4Q9H5U6 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZCCHC4Q9H5U6 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.26■□□□□ 0.67
ZCCHC4Q9H5U6 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZCCHC4Q9H5U6 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.26■□□□□ 0.67
ZCCHC4Q9H5U6 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
ZCCHC4Q9H5U6 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.26■□□□□ 0.67
ZCCHC4Q9H5U6 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZCCHC4Q9H5U6 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
ZCCHC4Q9H5U6 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.25■□□□□ 0.67
ZCCHC4Q9H5U6 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.25■□□□□ 0.67
ZCCHC4Q9H5U6 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZCCHC4Q9H5U6 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZCCHC4Q9H5U6 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.25■□□□□ 0.67
ZCCHC4Q9H5U6 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
ZCCHC4Q9H5U6 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC19.25■□□□□ 0.67
ZCCHC4Q9H5U6 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.25■□□□□ 0.67
ZCCHC4Q9H5U6 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
ZCCHC4Q9H5U6 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZCCHC4Q9H5U6 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZCCHC4Q9H5U6 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.25■□□□□ 0.67
ZCCHC4Q9H5U6 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
ZCCHC4Q9H5U6 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZCCHC4Q9H5U6 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZCCHC4Q9H5U6 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
ZCCHC4Q9H5U6 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ZCCHC4Q9H5U6 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ZCCHC4Q9H5U6 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.24■□□□□ 0.67
ZCCHC4Q9H5U6 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.24■□□□□ 0.67
ZCCHC4Q9H5U6 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC19.24■□□□□ 0.67
ZCCHC4Q9H5U6 AC103834.1-201ENST00000520383 144 ntBASIC19.24■□□□□ 0.67
ZCCHC4Q9H5U6 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC19.24■□□□□ 0.67
ZCCHC4Q9H5U6 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZCCHC4Q9H5U6 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZCCHC4Q9H5U6 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZCCHC4Q9H5U6 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ZCCHC4Q9H5U6 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZCCHC4Q9H5U6 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZCCHC4Q9H5U6 AC010542.4-201ENST00000563151 1910 ntBASIC19.23■□□□□ 0.67
ZCCHC4Q9H5U6 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ZCCHC4Q9H5U6 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.23■□□□□ 0.67
ZCCHC4Q9H5U6 AC144652.1-201ENST00000609974 1624 ntBASIC19.23■□□□□ 0.67
ZCCHC4Q9H5U6 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZCCHC4Q9H5U6 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZCCHC4Q9H5U6 YBX1P4-201ENST00000392794 808 ntBASIC19.23■□□□□ 0.67
ZCCHC4Q9H5U6 AL033527.3-201ENST00000566366 1196 ntBASIC19.23■□□□□ 0.67
ZCCHC4Q9H5U6 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
ZCCHC4Q9H5U6 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.23■□□□□ 0.67
ZCCHC4Q9H5U6 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
ZCCHC4Q9H5U6 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ZCCHC4Q9H5U6 FAM99A-202ENST00000538190 1989 ntBASIC19.23■□□□□ 0.67
ZCCHC4Q9H5U6 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZCCHC4Q9H5U6 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.22■□□□□ 0.67
ZCCHC4Q9H5U6 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ZCCHC4Q9H5U6 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZCCHC4Q9H5U6 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZCCHC4Q9H5U6 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZCCHC4Q9H5U6 AC103724.3-201ENST00000564481 992 ntBASIC19.22■□□□□ 0.67
ZCCHC4Q9H5U6 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.22■□□□□ 0.67
ZCCHC4Q9H5U6 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZCCHC4Q9H5U6 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZCCHC4Q9H5U6 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
ZCCHC4Q9H5U6 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZCCHC4Q9H5U6 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
ZCCHC4Q9H5U6 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.21■□□□□ 0.67
ZCCHC4Q9H5U6 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.21■□□□□ 0.67
ZCCHC4Q9H5U6 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZCCHC4Q9H5U6 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZCCHC4Q9H5U6 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ZCCHC4Q9H5U6 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC19.21■□□□□ 0.67
ZCCHC4Q9H5U6 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.21■□□□□ 0.67
ZCCHC4Q9H5U6 KRT8P33-201ENST00000508125 1423 ntBASIC19.21■□□□□ 0.67
ZCCHC4Q9H5U6 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
ZCCHC4Q9H5U6 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms