Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC25.99■■□□□ 1.75
RNF41Q9H4P4 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC25.99■■□□□ 1.75
RNF41Q9H4P4 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
RNF41Q9H4P4 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
RNF41Q9H4P4 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC25.98■■□□□ 1.75
RNF41Q9H4P4 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC25.98■■□□□ 1.75
RNF41Q9H4P4 GRAMD4P2-201ENST00000423297 1097 ntBASIC25.98■■□□□ 1.75
RNF41Q9H4P4 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC25.98■■□□□ 1.75
RNF41Q9H4P4 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC25.98■■□□□ 1.75
RNF41Q9H4P4 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
RNF41Q9H4P4 EI24-211ENST00000534546 1544 ntTSL 2 BASIC25.98■■□□□ 1.75
RNF41Q9H4P4 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC25.97■■□□□ 1.75
RNF41Q9H4P4 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC25.97■■□□□ 1.75
RNF41Q9H4P4 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC25.97■■□□□ 1.75
RNF41Q9H4P4 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
RNF41Q9H4P4 HYI-206ENST00000372434 1025 ntTSL 5 BASIC25.97■■□□□ 1.75
RNF41Q9H4P4 EBPL-204ENST00000378272 766 ntTSL 3 BASIC25.97■■□□□ 1.75
RNF41Q9H4P4 AICDA-202ENST00000537228 667 ntTSL 5 BASIC25.97■■□□□ 1.75
RNF41Q9H4P4 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
RNF41Q9H4P4 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC25.97■■□□□ 1.75
RNF41Q9H4P4 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
RNF41Q9H4P4 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC25.96■■□□□ 1.75
RNF41Q9H4P4 LINC01960-201ENST00000563759 1884 ntBASIC25.96■■□□□ 1.75
RNF41Q9H4P4 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC25.96■■□□□ 1.75
RNF41Q9H4P4 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
RNF41Q9H4P4 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC25.96■■□□□ 1.75
RNF41Q9H4P4 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
RNF41Q9H4P4 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
RNF41Q9H4P4 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC25.96■■□□□ 1.75
RNF41Q9H4P4 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC25.95■■□□□ 1.75
RNF41Q9H4P4 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC25.95■■□□□ 1.75
RNF41Q9H4P4 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC25.95■■□□□ 1.75
RNF41Q9H4P4 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC25.95■■□□□ 1.74
RNF41Q9H4P4 AC087239.1-201ENST00000622671 572 ntBASIC25.95■■□□□ 1.74
RNF41Q9H4P4 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
RNF41Q9H4P4 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
RNF41Q9H4P4 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC25.95■■□□□ 1.74
RNF41Q9H4P4 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC25.95■■□□□ 1.74
RNF41Q9H4P4 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC25.95■■□□□ 1.74
RNF41Q9H4P4 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC25.95■■□□□ 1.74
RNF41Q9H4P4 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
RNF41Q9H4P4 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC25.94■■□□□ 1.74
RNF41Q9H4P4 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC25.94■■□□□ 1.74
RNF41Q9H4P4 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
RNF41Q9H4P4 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC25.94■■□□□ 1.74
RNF41Q9H4P4 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC25.94■■□□□ 1.74
RNF41Q9H4P4 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC25.94■■□□□ 1.74
RNF41Q9H4P4 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC25.94■■□□□ 1.74
RNF41Q9H4P4 IGHV3-19-201ENST00000521488 291 ntBASIC25.94■■□□□ 1.74
RNF41Q9H4P4 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
RNF41Q9H4P4 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
RNF41Q9H4P4 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC25.94■■□□□ 1.74
RNF41Q9H4P4 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC25.94■■□□□ 1.74
RNF41Q9H4P4 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
RNF41Q9H4P4 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
RNF41Q9H4P4 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
RNF41Q9H4P4 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC25.93■■□□□ 1.74
RNF41Q9H4P4 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC25.93■■□□□ 1.74
RNF41Q9H4P4 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC25.93■■□□□ 1.74
RNF41Q9H4P4 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC25.93■■□□□ 1.74
RNF41Q9H4P4 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC25.93■■□□□ 1.74
RNF41Q9H4P4 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
RNF41Q9H4P4 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC25.93■■□□□ 1.74
RNF41Q9H4P4 USP45-205ENST00000472914 1617 ntTSL 5 BASIC25.92■■□□□ 1.74
RNF41Q9H4P4 AC019069.1-201ENST00000610008 1333 ntBASIC25.92■■□□□ 1.74
RNF41Q9H4P4 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC25.92■■□□□ 1.74
RNF41Q9H4P4 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
RNF41Q9H4P4 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
RNF41Q9H4P4 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
RNF41Q9H4P4 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
RNF41Q9H4P4 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC25.92■■□□□ 1.74
RNF41Q9H4P4 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
RNF41Q9H4P4 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC25.92■■□□□ 1.74
RNF41Q9H4P4 ME2-208ENST00000638937 2471 ntTSL 5 BASIC25.92■■□□□ 1.74
RNF41Q9H4P4 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC25.92■■□□□ 1.74
RNF41Q9H4P4 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
RNF41Q9H4P4 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
RNF41Q9H4P4 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC25.91■■□□□ 1.74
RNF41Q9H4P4 AC105265.2-201ENST00000467189 838 ntBASIC25.91■■□□□ 1.74
RNF41Q9H4P4 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC25.91■■□□□ 1.74
RNF41Q9H4P4 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
RNF41Q9H4P4 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC25.91■■□□□ 1.74
RNF41Q9H4P4 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
RNF41Q9H4P4 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC25.91■■□□□ 1.74
RNF41Q9H4P4 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
RNF41Q9H4P4 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
RNF41Q9H4P4 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
RNF41Q9H4P4 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC25.91■■□□□ 1.74
RNF41Q9H4P4 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC25.9■■□□□ 1.74
RNF41Q9H4P4 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
RNF41Q9H4P4 AC010141.3-201ENST00000456659 717 ntBASIC25.9■■□□□ 1.74
RNF41Q9H4P4 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC25.9■■□□□ 1.74
RNF41Q9H4P4 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
RNF41Q9H4P4 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC25.9■■□□□ 1.74
RNF41Q9H4P4 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
RNF41Q9H4P4 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC25.9■■□□□ 1.74
RNF41Q9H4P4 TSPY26P-201ENST00000476365 1326 ntBASIC25.89■■□□□ 1.74
RNF41Q9H4P4 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
RNF41Q9H4P4 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC25.89■■□□□ 1.74
RNF41Q9H4P4 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC25.89■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms