Protein–RNA interactions for Protein: Q9H3M0

KCNF1, Potassium voltage-gated channel subfamily F member 1, humanhuman

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNF1Q9H3M0 LINC01521-201ENST00000504184 1943 ntBASIC24.05■■□□□ 1.44
KCNF1Q9H3M0 USF2-207ENST00000595068 1612 ntTSL 5 BASIC24.05■■□□□ 1.44
KCNF1Q9H3M0 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC24.05■■□□□ 1.44
KCNF1Q9H3M0 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
KCNF1Q9H3M0 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
KCNF1Q9H3M0 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC24.04■■□□□ 1.44
KCNF1Q9H3M0 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
KCNF1Q9H3M0 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
KCNF1Q9H3M0 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
KCNF1Q9H3M0 ME2-206ENST00000638410 2289 ntTSL 5 BASIC24.04■■□□□ 1.44
KCNF1Q9H3M0 ME2-210ENST00000639255 2262 ntTSL 5 BASIC24.04■■□□□ 1.44
KCNF1Q9H3M0 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
KCNF1Q9H3M0 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
KCNF1Q9H3M0 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC24.03■■□□□ 1.44
KCNF1Q9H3M0 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC24.03■■□□□ 1.44
KCNF1Q9H3M0 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC24.03■■□□□ 1.44
KCNF1Q9H3M0 FEM1AP4-201ENST00000443167 1987 ntBASIC24.03■■□□□ 1.44
KCNF1Q9H3M0 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
KCNF1Q9H3M0 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
KCNF1Q9H3M0 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
KCNF1Q9H3M0 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC24.02■■□□□ 1.44
KCNF1Q9H3M0 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
KCNF1Q9H3M0 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
KCNF1Q9H3M0 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC24.02■■□□□ 1.44
KCNF1Q9H3M0 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.43
KCNF1Q9H3M0 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
KCNF1Q9H3M0 Z98882.1-201ENST00000622160 2253 ntBASIC24.01■■□□□ 1.43
KCNF1Q9H3M0 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC24.01■■□□□ 1.43
KCNF1Q9H3M0 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC24.01■■□□□ 1.43
KCNF1Q9H3M0 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC24.01■■□□□ 1.43
KCNF1Q9H3M0 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC24.01■■□□□ 1.43
KCNF1Q9H3M0 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
KCNF1Q9H3M0 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
KCNF1Q9H3M0 ABHD17AP4-201ENST00000411545 909 ntBASIC24.01■■□□□ 1.43
KCNF1Q9H3M0 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
KCNF1Q9H3M0 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
KCNF1Q9H3M0 AC133552.2-201ENST00000619106 1032 ntBASIC24.01■■□□□ 1.43
KCNF1Q9H3M0 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
KCNF1Q9H3M0 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
KCNF1Q9H3M0 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC24.01■■□□□ 1.43
KCNF1Q9H3M0 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
KCNF1Q9H3M0 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC24.01■■□□□ 1.43
KCNF1Q9H3M0 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
KCNF1Q9H3M0 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC24■■□□□ 1.43
KCNF1Q9H3M0 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
KCNF1Q9H3M0 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
KCNF1Q9H3M0 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC24■■□□□ 1.43
KCNF1Q9H3M0 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC24■■□□□ 1.43
KCNF1Q9H3M0 CEP120-209ENST00000515110 606 ntTSL 3 BASIC24■■□□□ 1.43
KCNF1Q9H3M0 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
KCNF1Q9H3M0 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
KCNF1Q9H3M0 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC24■■□□□ 1.43
KCNF1Q9H3M0 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC24■■□□□ 1.43
KCNF1Q9H3M0 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC24■■□□□ 1.43
KCNF1Q9H3M0 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC24■■□□□ 1.43
KCNF1Q9H3M0 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC24■■□□□ 1.43
KCNF1Q9H3M0 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC23.99■■□□□ 1.43
KCNF1Q9H3M0 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
KCNF1Q9H3M0 AC011551.1-201ENST00000614101 683 ntBASIC23.99■■□□□ 1.43
KCNF1Q9H3M0 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
KCNF1Q9H3M0 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
KCNF1Q9H3M0 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.99■■□□□ 1.43
KCNF1Q9H3M0 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC23.99■■□□□ 1.43
KCNF1Q9H3M0 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC23.99■■□□□ 1.43
KCNF1Q9H3M0 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
KCNF1Q9H3M0 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
KCNF1Q9H3M0 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC23.99■■□□□ 1.43
KCNF1Q9H3M0 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC23.99■■□□□ 1.43
KCNF1Q9H3M0 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
KCNF1Q9H3M0 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC23.98■■□□□ 1.43
KCNF1Q9H3M0 RNF165-205ENST00000588679 2904 ntBASIC23.98■■□□□ 1.43
KCNF1Q9H3M0 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
KCNF1Q9H3M0 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
KCNF1Q9H3M0 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC23.98■■□□□ 1.43
KCNF1Q9H3M0 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC23.98■■□□□ 1.43
KCNF1Q9H3M0 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC23.98■■□□□ 1.43
KCNF1Q9H3M0 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
KCNF1Q9H3M0 GOLGA2P6-201ENST00000340929 2049 ntBASIC23.98■■□□□ 1.43
KCNF1Q9H3M0 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
KCNF1Q9H3M0 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
KCNF1Q9H3M0 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
KCNF1Q9H3M0 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
KCNF1Q9H3M0 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC23.98■■□□□ 1.43
KCNF1Q9H3M0 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
KCNF1Q9H3M0 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
KCNF1Q9H3M0 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
KCNF1Q9H3M0 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
KCNF1Q9H3M0 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC23.97■■□□□ 1.43
KCNF1Q9H3M0 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
KCNF1Q9H3M0 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
KCNF1Q9H3M0 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC23.97■■□□□ 1.43
KCNF1Q9H3M0 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
KCNF1Q9H3M0 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
KCNF1Q9H3M0 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
KCNF1Q9H3M0 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
KCNF1Q9H3M0 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
KCNF1Q9H3M0 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
KCNF1Q9H3M0 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
KCNF1Q9H3M0 LBH-205ENST00000407930 756 ntTSL 2 BASIC23.96■■□□□ 1.43
KCNF1Q9H3M0 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms