Protein–RNA interactions for Protein: Q9H094

NBPF3, Neuroblastoma breakpoint family member 3, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3Q9H094 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
NBPF3Q9H094 COMT-203ENST00000403184 2217 ntTSL 2 BASIC26.19■■□□□ 1.78
NBPF3Q9H094 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC26.18■■□□□ 1.78
NBPF3Q9H094 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC26.18■■□□□ 1.78
NBPF3Q9H094 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
NBPF3Q9H094 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC26.18■■□□□ 1.78
NBPF3Q9H094 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
NBPF3Q9H094 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC26.18■■□□□ 1.78
NBPF3Q9H094 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC26.18■■□□□ 1.78
NBPF3Q9H094 MAG-206ENST00000597035 542 ntTSL 4 BASIC26.18■■□□□ 1.78
NBPF3Q9H094 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC26.18■■□□□ 1.78
NBPF3Q9H094 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC26.18■■□□□ 1.78
NBPF3Q9H094 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
NBPF3Q9H094 RASA4CP-201ENST00000424092 1398 ntBASIC26.18■■□□□ 1.78
NBPF3Q9H094 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
NBPF3Q9H094 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC26.17■■□□□ 1.78
NBPF3Q9H094 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC26.17■■□□□ 1.78
NBPF3Q9H094 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC26.17■■□□□ 1.78
NBPF3Q9H094 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
NBPF3Q9H094 AC090192.1-201ENST00000517740 490 ntBASIC26.17■■□□□ 1.78
NBPF3Q9H094 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC26.17■■□□□ 1.78
NBPF3Q9H094 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC26.17■■□□□ 1.78
NBPF3Q9H094 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
NBPF3Q9H094 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC26.17■■□□□ 1.78
NBPF3Q9H094 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC26.17■■□□□ 1.78
NBPF3Q9H094 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
NBPF3Q9H094 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
NBPF3Q9H094 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
NBPF3Q9H094 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
NBPF3Q9H094 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
NBPF3Q9H094 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
NBPF3Q9H094 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
NBPF3Q9H094 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC26.16■■□□□ 1.78
NBPF3Q9H094 RARRES2P11-201ENST00000635158 484 ntBASIC26.16■■□□□ 1.78
NBPF3Q9H094 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC26.16■■□□□ 1.78
NBPF3Q9H094 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
NBPF3Q9H094 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
NBPF3Q9H094 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC26.15■■□□□ 1.78
NBPF3Q9H094 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC26.15■■□□□ 1.78
NBPF3Q9H094 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC26.15■■□□□ 1.78
NBPF3Q9H094 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
NBPF3Q9H094 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
NBPF3Q9H094 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.78
NBPF3Q9H094 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC26.14■■□□□ 1.78
NBPF3Q9H094 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC26.14■■□□□ 1.78
NBPF3Q9H094 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
NBPF3Q9H094 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
NBPF3Q9H094 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
NBPF3Q9H094 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC26.14■■□□□ 1.77
NBPF3Q9H094 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
NBPF3Q9H094 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
NBPF3Q9H094 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
NBPF3Q9H094 BX842568.3-201ENST00000418104 571 ntBASIC26.13■■□□□ 1.77
NBPF3Q9H094 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC26.13■■□□□ 1.77
NBPF3Q9H094 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC26.13■■□□□ 1.77
NBPF3Q9H094 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC26.13■■□□□ 1.77
NBPF3Q9H094 C1orf229-201ENST00000623686 2258 ntBASIC26.13■■□□□ 1.77
NBPF3Q9H094 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC26.13■■□□□ 1.77
NBPF3Q9H094 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC26.12■■□□□ 1.77
NBPF3Q9H094 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC26.12■■□□□ 1.77
NBPF3Q9H094 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC26.12■■□□□ 1.77
NBPF3Q9H094 IRS3P-201ENST00000223076 1006 ntBASIC26.12■■□□□ 1.77
NBPF3Q9H094 AC008764.7-201ENST00000593779 1081 ntBASIC26.12■■□□□ 1.77
NBPF3Q9H094 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
NBPF3Q9H094 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
NBPF3Q9H094 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
NBPF3Q9H094 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
NBPF3Q9H094 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
NBPF3Q9H094 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC26.11■■□□□ 1.77
NBPF3Q9H094 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
NBPF3Q9H094 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC26.11■■□□□ 1.77
NBPF3Q9H094 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
NBPF3Q9H094 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC26.11■■□□□ 1.77
NBPF3Q9H094 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC26.11■■□□□ 1.77
NBPF3Q9H094 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
NBPF3Q9H094 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC26.11■■□□□ 1.77
NBPF3Q9H094 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC26.11■■□□□ 1.77
NBPF3Q9H094 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
NBPF3Q9H094 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC26.1■■□□□ 1.77
NBPF3Q9H094 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC26.1■■□□□ 1.77
NBPF3Q9H094 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
NBPF3Q9H094 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
NBPF3Q9H094 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
NBPF3Q9H094 AC068473.5-201ENST00000616428 2072 ntBASIC26.1■■□□□ 1.77
NBPF3Q9H094 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC26.1■■□□□ 1.77
NBPF3Q9H094 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
NBPF3Q9H094 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC26.1■■□□□ 1.77
NBPF3Q9H094 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC26.1■■□□□ 1.77
NBPF3Q9H094 AC099791.1-201ENST00000416440 715 ntBASIC26.1■■□□□ 1.77
NBPF3Q9H094 AC027682.1-201ENST00000562846 899 ntBASIC26.1■■□□□ 1.77
NBPF3Q9H094 AC233992.3-201ENST00000607491 485 ntBASIC26.1■■□□□ 1.77
NBPF3Q9H094 AL031602.1-201ENST00000633169 911 ntBASIC26.1■■□□□ 1.77
NBPF3Q9H094 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC26.1■■□□□ 1.77
NBPF3Q9H094 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
NBPF3Q9H094 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
NBPF3Q9H094 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
NBPF3Q9H094 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
NBPF3Q9H094 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
NBPF3Q9H094 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
NBPF3Q9H094 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC26.09■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms