Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SHANK2-AS3Q9BTD1 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
SHANK2-AS3Q9BTD1 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SHANK2-AS3Q9BTD1 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SHANK2-AS3Q9BTD1 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC16.92■□□□□ 0.3
SHANK2-AS3Q9BTD1 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
SHANK2-AS3Q9BTD1 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
SHANK2-AS3Q9BTD1 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHANK2-AS3Q9BTD1 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHANK2-AS3Q9BTD1 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHANK2-AS3Q9BTD1 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC16.91■□□□□ 0.3
SHANK2-AS3Q9BTD1 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHANK2-AS3Q9BTD1 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHANK2-AS3Q9BTD1 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHANK2-AS3Q9BTD1 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHANK2-AS3Q9BTD1 CLTA-206ENST00000466396 695 ntTSL 2 BASIC16.91■□□□□ 0.3
SHANK2-AS3Q9BTD1 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC16.91■□□□□ 0.3
SHANK2-AS3Q9BTD1 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
SHANK2-AS3Q9BTD1 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SHANK2-AS3Q9BTD1 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHANK2-AS3Q9BTD1 AC007375.3-201ENST00000600936 2314 ntBASIC16.91■□□□□ 0.3
SHANK2-AS3Q9BTD1 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHANK2-AS3Q9BTD1 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SHANK2-AS3Q9BTD1 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHANK2-AS3Q9BTD1 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SHANK2-AS3Q9BTD1 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SHANK2-AS3Q9BTD1 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SHANK2-AS3Q9BTD1 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
SHANK2-AS3Q9BTD1 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC16.9■□□□□ 0.3
SHANK2-AS3Q9BTD1 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC16.9■□□□□ 0.3
SHANK2-AS3Q9BTD1 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC16.9■□□□□ 0.3
SHANK2-AS3Q9BTD1 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SHANK2-AS3Q9BTD1 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
SHANK2-AS3Q9BTD1 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC16.89■□□□□ 0.3
SHANK2-AS3Q9BTD1 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SHANK2-AS3Q9BTD1 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SHANK2-AS3Q9BTD1 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SHANK2-AS3Q9BTD1 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
SHANK2-AS3Q9BTD1 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SHANK2-AS3Q9BTD1 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SHANK2-AS3Q9BTD1 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SHANK2-AS3Q9BTD1 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
SHANK2-AS3Q9BTD1 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
SHANK2-AS3Q9BTD1 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC16.89■□□□□ 0.29
SHANK2-AS3Q9BTD1 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
SHANK2-AS3Q9BTD1 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SHANK2-AS3Q9BTD1 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC16.89■□□□□ 0.29
SHANK2-AS3Q9BTD1 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC16.89■□□□□ 0.29
SHANK2-AS3Q9BTD1 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC16.89■□□□□ 0.29
SHANK2-AS3Q9BTD1 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC16.89■□□□□ 0.29
SHANK2-AS3Q9BTD1 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SHANK2-AS3Q9BTD1 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SHANK2-AS3Q9BTD1 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC16.88■□□□□ 0.29
SHANK2-AS3Q9BTD1 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SHANK2-AS3Q9BTD1 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC16.88■□□□□ 0.29
SHANK2-AS3Q9BTD1 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
SHANK2-AS3Q9BTD1 FBXW4P1-201ENST00000426721 2239 ntBASIC16.88■□□□□ 0.29
SHANK2-AS3Q9BTD1 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
SHANK2-AS3Q9BTD1 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SHANK2-AS3Q9BTD1 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SHANK2-AS3Q9BTD1 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC16.88■□□□□ 0.29
SHANK2-AS3Q9BTD1 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SHANK2-AS3Q9BTD1 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SHANK2-AS3Q9BTD1 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SHANK2-AS3Q9BTD1 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SHANK2-AS3Q9BTD1 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
SHANK2-AS3Q9BTD1 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SHANK2-AS3Q9BTD1 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SHANK2-AS3Q9BTD1 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC16.87■□□□□ 0.29
SHANK2-AS3Q9BTD1 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SHANK2-AS3Q9BTD1 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
SHANK2-AS3Q9BTD1 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHANK2-AS3Q9BTD1 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHANK2-AS3Q9BTD1 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
SHANK2-AS3Q9BTD1 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
SHANK2-AS3Q9BTD1 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
SHANK2-AS3Q9BTD1 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHANK2-AS3Q9BTD1 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC16.87■□□□□ 0.29
SHANK2-AS3Q9BTD1 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
SHANK2-AS3Q9BTD1 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC16.87■□□□□ 0.29
SHANK2-AS3Q9BTD1 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC16.87■□□□□ 0.29
SHANK2-AS3Q9BTD1 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC16.87■□□□□ 0.29
SHANK2-AS3Q9BTD1 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHANK2-AS3Q9BTD1 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC16.87■□□□□ 0.29
SHANK2-AS3Q9BTD1 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHANK2-AS3Q9BTD1 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHANK2-AS3Q9BTD1 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHANK2-AS3Q9BTD1 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
SHANK2-AS3Q9BTD1 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC16.87■□□□□ 0.29
SHANK2-AS3Q9BTD1 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHANK2-AS3Q9BTD1 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHANK2-AS3Q9BTD1 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHANK2-AS3Q9BTD1 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SHANK2-AS3Q9BTD1 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHANK2-AS3Q9BTD1 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
SHANK2-AS3Q9BTD1 PRTG-204ENST00000561292 833 ntTSL 3 BASIC16.86■□□□□ 0.29
SHANK2-AS3Q9BTD1 AC092028.1-203ENST00000608262 953 ntBASIC16.86■□□□□ 0.29
SHANK2-AS3Q9BTD1 NKILA-201ENST00000613231 537 ntTSL 4 BASIC16.86■□□□□ 0.29
SHANK2-AS3Q9BTD1 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHANK2-AS3Q9BTD1 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms