Protein–RNA interactions for Protein: Q9BRT8

CBWD1, COBW domain-containing protein 1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1Q9BRT8 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CBWD1Q9BRT8 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CBWD1Q9BRT8 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CBWD1Q9BRT8 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
CBWD1Q9BRT8 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CBWD1Q9BRT8 SNX3-202ENST00000349379 890 ntTSL 2 BASIC24.03■■□□□ 1.44
CBWD1Q9BRT8 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CBWD1Q9BRT8 AC087742.1-201ENST00000575880 1738 ntBASIC24.03■■□□□ 1.44
CBWD1Q9BRT8 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CBWD1Q9BRT8 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
CBWD1Q9BRT8 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
CBWD1Q9BRT8 LINC01960-201ENST00000563759 1884 ntBASIC24.02■■□□□ 1.44
CBWD1Q9BRT8 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CBWD1Q9BRT8 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC24.02■■□□□ 1.44
CBWD1Q9BRT8 TERT-206ENST00000508104 2486 ntTSL 5 BASIC24.02■■□□□ 1.44
CBWD1Q9BRT8 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC24.02■■□□□ 1.44
CBWD1Q9BRT8 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
CBWD1Q9BRT8 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC24.02■■□□□ 1.44
CBWD1Q9BRT8 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC24.02■■□□□ 1.44
CBWD1Q9BRT8 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC24.02■■□□□ 1.44
CBWD1Q9BRT8 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC24.02■■□□□ 1.44
CBWD1Q9BRT8 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC24.02■■□□□ 1.44
CBWD1Q9BRT8 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
CBWD1Q9BRT8 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.44
CBWD1Q9BRT8 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CBWD1Q9BRT8 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
CBWD1Q9BRT8 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CBWD1Q9BRT8 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC24.01■■□□□ 1.43
CBWD1Q9BRT8 AL031432.3-201ENST00000607698 485 ntBASIC24.01■■□□□ 1.43
CBWD1Q9BRT8 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CBWD1Q9BRT8 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CBWD1Q9BRT8 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CBWD1Q9BRT8 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
CBWD1Q9BRT8 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CBWD1Q9BRT8 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC24■■□□□ 1.43
CBWD1Q9BRT8 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CBWD1Q9BRT8 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CBWD1Q9BRT8 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CBWD1Q9BRT8 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CBWD1Q9BRT8 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC24■■□□□ 1.43
CBWD1Q9BRT8 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CBWD1Q9BRT8 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC23.99■■□□□ 1.43
CBWD1Q9BRT8 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
CBWD1Q9BRT8 GRAMD4P4-201ENST00000613563 1115 ntBASIC23.99■■□□□ 1.43
CBWD1Q9BRT8 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC23.99■■□□□ 1.43
CBWD1Q9BRT8 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CBWD1Q9BRT8 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CBWD1Q9BRT8 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CBWD1Q9BRT8 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC23.98■■□□□ 1.43
CBWD1Q9BRT8 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC23.98■■□□□ 1.43
CBWD1Q9BRT8 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CBWD1Q9BRT8 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CBWD1Q9BRT8 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CBWD1Q9BRT8 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC23.98■■□□□ 1.43
CBWD1Q9BRT8 RALB-208ENST00000631312 311 ntTSL 5 BASIC23.98■■□□□ 1.43
CBWD1Q9BRT8 AL031602.1-201ENST00000633169 911 ntBASIC23.98■■□□□ 1.43
CBWD1Q9BRT8 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CBWD1Q9BRT8 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
CBWD1Q9BRT8 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CBWD1Q9BRT8 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC23.98■■□□□ 1.43
CBWD1Q9BRT8 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CBWD1Q9BRT8 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CBWD1Q9BRT8 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CBWD1Q9BRT8 EDA-201ENST00000338901 1233 ntBASIC23.97■■□□□ 1.43
CBWD1Q9BRT8 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.43
CBWD1Q9BRT8 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.43
CBWD1Q9BRT8 BX842568.3-201ENST00000418104 571 ntBASIC23.97■■□□□ 1.43
CBWD1Q9BRT8 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC23.97■■□□□ 1.43
CBWD1Q9BRT8 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC23.97■■□□□ 1.43
CBWD1Q9BRT8 AP001330.3-201ENST00000520123 633 ntBASIC23.97■■□□□ 1.43
CBWD1Q9BRT8 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC23.97■■□□□ 1.43
CBWD1Q9BRT8 AC012676.1-201ENST00000574705 1949 ntBASIC23.97■■□□□ 1.43
CBWD1Q9BRT8 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CBWD1Q9BRT8 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CBWD1Q9BRT8 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CBWD1Q9BRT8 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC23.96■■□□□ 1.43
CBWD1Q9BRT8 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CBWD1Q9BRT8 EI24-211ENST00000534546 1544 ntTSL 2 BASIC23.96■■□□□ 1.43
CBWD1Q9BRT8 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
CBWD1Q9BRT8 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CBWD1Q9BRT8 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC23.96■■□□□ 1.43
CBWD1Q9BRT8 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
CBWD1Q9BRT8 MIR638-201ENST00000385237 100 ntBASIC23.96■■□□□ 1.43
CBWD1Q9BRT8 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
CBWD1Q9BRT8 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
CBWD1Q9BRT8 AC133561.4-201ENST00000566112 224 ntBASIC23.96■■□□□ 1.43
CBWD1Q9BRT8 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
CBWD1Q9BRT8 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
CBWD1Q9BRT8 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC23.96■■□□□ 1.43
CBWD1Q9BRT8 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
CBWD1Q9BRT8 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC23.95■■□□□ 1.43
CBWD1Q9BRT8 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.42
CBWD1Q9BRT8 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
CBWD1Q9BRT8 AF213884.3-201ENST00000563833 479 ntBASIC23.95■■□□□ 1.42
CBWD1Q9BRT8 AC008764.7-201ENST00000593779 1081 ntBASIC23.95■■□□□ 1.42
CBWD1Q9BRT8 MAG-206ENST00000597035 542 ntTSL 4 BASIC23.95■■□□□ 1.42
CBWD1Q9BRT8 AL355001.2-201ENST00000620617 1191 ntBASIC23.95■■□□□ 1.42
CBWD1Q9BRT8 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
CBWD1Q9BRT8 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC23.95■■□□□ 1.42
CBWD1Q9BRT8 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms