Protein–RNA interactions for Protein: Q9BRS2

RIOK1, Serine/threonine-protein kinase RIO1, humanhuman

Known RBP Predictions only

Length 568 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK1Q9BRS2 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC26.32■■□□□ 1.8
RIOK1Q9BRS2 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
RIOK1Q9BRS2 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
RIOK1Q9BRS2 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
RIOK1Q9BRS2 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
RIOK1Q9BRS2 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC26.32■■□□□ 1.8
RIOK1Q9BRS2 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC26.32■■□□□ 1.8
RIOK1Q9BRS2 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RIOK1Q9BRS2 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
RIOK1Q9BRS2 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RIOK1Q9BRS2 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RIOK1Q9BRS2 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RIOK1Q9BRS2 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
RIOK1Q9BRS2 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RIOK1Q9BRS2 LHPP-203ENST00000392757 840 ntTSL 3 BASIC26.31■■□□□ 1.8
RIOK1Q9BRS2 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC26.31■■□□□ 1.8
RIOK1Q9BRS2 AC027612.3-201ENST00000413684 1047 ntBASIC26.31■■□□□ 1.8
RIOK1Q9BRS2 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC26.31■■□□□ 1.8
RIOK1Q9BRS2 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC26.31■■□□□ 1.8
RIOK1Q9BRS2 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC26.31■■□□□ 1.8
RIOK1Q9BRS2 MIR6084-201ENST00000622012 110 ntBASIC26.31■■□□□ 1.8
RIOK1Q9BRS2 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
RIOK1Q9BRS2 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
RIOK1Q9BRS2 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
RIOK1Q9BRS2 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RIOK1Q9BRS2 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RIOK1Q9BRS2 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC26.31■■□□□ 1.8
RIOK1Q9BRS2 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RIOK1Q9BRS2 NME4-202ENST00000382940 766 ntTSL 3 BASIC26.3■■□□□ 1.8
RIOK1Q9BRS2 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RIOK1Q9BRS2 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC26.3■■□□□ 1.8
RIOK1Q9BRS2 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC26.3■■□□□ 1.8
RIOK1Q9BRS2 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC26.3■■□□□ 1.8
RIOK1Q9BRS2 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC26.3■■□□□ 1.8
RIOK1Q9BRS2 MIR5787-201ENST00000611784 55 ntBASIC26.3■■□□□ 1.8
RIOK1Q9BRS2 NME4-211ENST00000620944 1193 ntTSL 2 BASIC26.3■■□□□ 1.8
RIOK1Q9BRS2 AC068587.7-201ENST00000641602 218 ntBASIC26.3■■□□□ 1.8
RIOK1Q9BRS2 RARA-203ENST00000394086 2008 ntTSL 2 BASIC26.3■■□□□ 1.8
RIOK1Q9BRS2 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RIOK1Q9BRS2 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC26.29■■□□□ 1.8
RIOK1Q9BRS2 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
RIOK1Q9BRS2 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RIOK1Q9BRS2 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC26.29■■□□□ 1.8
RIOK1Q9BRS2 AL354811.1-201ENST00000610286 706 ntBASIC26.29■■□□□ 1.8
RIOK1Q9BRS2 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
RIOK1Q9BRS2 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC26.29■■□□□ 1.8
RIOK1Q9BRS2 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RIOK1Q9BRS2 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC26.29■■□□□ 1.8
RIOK1Q9BRS2 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
RIOK1Q9BRS2 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC26.28■■□□□ 1.8
RIOK1Q9BRS2 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC26.28■■□□□ 1.8
RIOK1Q9BRS2 YBX1P1-201ENST00000445822 960 ntBASIC26.28■■□□□ 1.8
RIOK1Q9BRS2 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC26.28■■□□□ 1.8
RIOK1Q9BRS2 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC26.28■■□□□ 1.8
RIOK1Q9BRS2 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC26.28■■□□□ 1.8
RIOK1Q9BRS2 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
RIOK1Q9BRS2 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC26.28■■□□□ 1.8
RIOK1Q9BRS2 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC26.27■■□□□ 1.8
RIOK1Q9BRS2 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC26.27■■□□□ 1.8
RIOK1Q9BRS2 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
RIOK1Q9BRS2 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC26.27■■□□□ 1.8
RIOK1Q9BRS2 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC26.27■■□□□ 1.8
RIOK1Q9BRS2 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC26.26■■□□□ 1.79
RIOK1Q9BRS2 USP45-205ENST00000472914 1617 ntTSL 5 BASIC26.26■■□□□ 1.79
RIOK1Q9BRS2 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC26.26■■□□□ 1.79
RIOK1Q9BRS2 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
RIOK1Q9BRS2 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
RIOK1Q9BRS2 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC26.26■■□□□ 1.79
RIOK1Q9BRS2 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC26.25■■□□□ 1.79
RIOK1Q9BRS2 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
RIOK1Q9BRS2 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC26.25■■□□□ 1.79
RIOK1Q9BRS2 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
RIOK1Q9BRS2 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC26.25■■□□□ 1.79
RIOK1Q9BRS2 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC26.25■■□□□ 1.79
RIOK1Q9BRS2 AC010141.3-201ENST00000456659 717 ntBASIC26.25■■□□□ 1.79
RIOK1Q9BRS2 ANKRD20A6P-201ENST00000618763 204 ntBASIC26.25■■□□□ 1.79
RIOK1Q9BRS2 AC105233.4-201ENST00000642045 216 ntBASIC26.25■■□□□ 1.79
RIOK1Q9BRS2 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
RIOK1Q9BRS2 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC26.25■■□□□ 1.79
RIOK1Q9BRS2 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC26.24■■□□□ 1.79
RIOK1Q9BRS2 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
RIOK1Q9BRS2 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
RIOK1Q9BRS2 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
RIOK1Q9BRS2 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
RIOK1Q9BRS2 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
RIOK1Q9BRS2 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
RIOK1Q9BRS2 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
RIOK1Q9BRS2 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
RIOK1Q9BRS2 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
RIOK1Q9BRS2 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
RIOK1Q9BRS2 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
RIOK1Q9BRS2 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
RIOK1Q9BRS2 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
RIOK1Q9BRS2 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
RIOK1Q9BRS2 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC26.23■■□□□ 1.79
RIOK1Q9BRS2 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC26.23■■□□□ 1.79
RIOK1Q9BRS2 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
RIOK1Q9BRS2 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
RIOK1Q9BRS2 NFE2L3P1-201ENST00000588207 1959 ntBASIC26.23■■□□□ 1.79
RIOK1Q9BRS2 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms