Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
FOXC2Q99958 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
FOXC2Q99958 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
FOXC2Q99958 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
FOXC2Q99958 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
FOXC2Q99958 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
FOXC2Q99958 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
FOXC2Q99958 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
FOXC2Q99958 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
FOXC2Q99958 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.6■□□□□ 0.57
FOXC2Q99958 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
FOXC2Q99958 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.6■□□□□ 0.57
FOXC2Q99958 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.6■□□□□ 0.57
FOXC2Q99958 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.6■□□□□ 0.57
FOXC2Q99958 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.6■□□□□ 0.57
FOXC2Q99958 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.6■□□□□ 0.57
FOXC2Q99958 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
FOXC2Q99958 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
FOXC2Q99958 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
FOXC2Q99958 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
FOXC2Q99958 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
FOXC2Q99958 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC18.59■□□□□ 0.57
FOXC2Q99958 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
FOXC2Q99958 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC18.59■□□□□ 0.57
FOXC2Q99958 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXC2Q99958 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.59■□□□□ 0.57
FOXC2Q99958 AC007322.1-201ENST00000426983 750 ntBASIC18.59■□□□□ 0.57
FOXC2Q99958 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
FOXC2Q99958 AC069152.1-201ENST00000438030 544 ntBASIC18.59■□□□□ 0.57
FOXC2Q99958 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.59■□□□□ 0.57
FOXC2Q99958 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.59■□□□□ 0.57
FOXC2Q99958 AL138781.1-201ENST00000566567 1274 ntBASIC18.59■□□□□ 0.57
FOXC2Q99958 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.59■□□□□ 0.57
FOXC2Q99958 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.59■□□□□ 0.57
FOXC2Q99958 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.59■□□□□ 0.57
FOXC2Q99958 AC008687.6-201ENST00000596318 630 ntBASIC18.59■□□□□ 0.57
FOXC2Q99958 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.59■□□□□ 0.57
FOXC2Q99958 AC133041.1-202ENST00000642053 222 ntBASIC18.59■□□□□ 0.57
FOXC2Q99958 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
FOXC2Q99958 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXC2Q99958 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.59■□□□□ 0.57
FOXC2Q99958 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
FOXC2Q99958 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
FOXC2Q99958 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC18.58■□□□□ 0.57
FOXC2Q99958 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
FOXC2Q99958 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
FOXC2Q99958 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
FOXC2Q99958 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
FOXC2Q99958 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
FOXC2Q99958 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
FOXC2Q99958 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
FOXC2Q99958 AC073210.2-201ENST00000430369 194 ntBASIC18.58■□□□□ 0.56
FOXC2Q99958 AC079140.4-201ENST00000507448 529 ntBASIC18.58■□□□□ 0.56
FOXC2Q99958 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
FOXC2Q99958 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.58■□□□□ 0.56
FOXC2Q99958 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.58■□□□□ 0.56
FOXC2Q99958 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
FOXC2Q99958 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.58■□□□□ 0.56
FOXC2Q99958 AC005181.1-201ENST00000604782 1256 ntBASIC18.58■□□□□ 0.56
FOXC2Q99958 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
FOXC2Q99958 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.58■□□□□ 0.56
FOXC2Q99958 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
FOXC2Q99958 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
FOXC2Q99958 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
FOXC2Q99958 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FOXC2Q99958 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC18.57■□□□□ 0.56
FOXC2Q99958 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
FOXC2Q99958 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
FOXC2Q99958 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
FOXC2Q99958 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
FOXC2Q99958 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
FOXC2Q99958 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.57■□□□□ 0.56
FOXC2Q99958 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
FOXC2Q99958 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC18.57■□□□□ 0.56
FOXC2Q99958 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC18.57■□□□□ 0.56
FOXC2Q99958 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FOXC2Q99958 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
FOXC2Q99958 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
FOXC2Q99958 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
FOXC2Q99958 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
FOXC2Q99958 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
FOXC2Q99958 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
FOXC2Q99958 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.56■□□□□ 0.56
FOXC2Q99958 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
FOXC2Q99958 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
FOXC2Q99958 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
FOXC2Q99958 LINC01529-204ENST00000636474 1715 ntBASIC18.55■□□□□ 0.56
FOXC2Q99958 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
FOXC2Q99958 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
FOXC2Q99958 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
FOXC2Q99958 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
FOXC2Q99958 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.55■□□□□ 0.56
FOXC2Q99958 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.55■□□□□ 0.56
FOXC2Q99958 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.55■□□□□ 0.56
FOXC2Q99958 ITM2C-210ENST00000620962 501 ntBASIC18.55■□□□□ 0.56
FOXC2Q99958 AC068587.7-201ENST00000641602 218 ntBASIC18.55■□□□□ 0.56
FOXC2Q99958 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.55■□□□□ 0.56
FOXC2Q99958 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
FOXC2Q99958 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
FOXC2Q99958 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms