Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC17.4■□□□□ 0.38
RNF2Q99496 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC17.4■□□□□ 0.38
RNF2Q99496 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF2Q99496 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC17.4■□□□□ 0.38
RNF2Q99496 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
RNF2Q99496 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF2Q99496 BID-212ENST00000614949 1988 ntTSL 5 BASIC17.4■□□□□ 0.38
RNF2Q99496 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF2Q99496 AC079630.1-202ENST00000618127 1840 ntBASIC17.4■□□□□ 0.38
RNF2Q99496 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC17.4■□□□□ 0.38
RNF2Q99496 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RNF2Q99496 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
RNF2Q99496 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
RNF2Q99496 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF2Q99496 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF2Q99496 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
RNF2Q99496 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF2Q99496 AC009299.2-201ENST00000482477 511 ntBASIC17.39■□□□□ 0.37
RNF2Q99496 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RNF2Q99496 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF2Q99496 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF2Q99496 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC17.39■□□□□ 0.37
RNF2Q99496 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RNF2Q99496 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC17.39■□□□□ 0.37
RNF2Q99496 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
RNF2Q99496 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
RNF2Q99496 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC17.38■□□□□ 0.37
RNF2Q99496 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC17.38■□□□□ 0.37
RNF2Q99496 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC17.38■□□□□ 0.37
RNF2Q99496 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF2Q99496 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC17.38■□□□□ 0.37
RNF2Q99496 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF2Q99496 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RNF2Q99496 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RNF2Q99496 TK2-202ENST00000417693 1046 ntTSL 2 BASIC17.38■□□□□ 0.37
RNF2Q99496 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC17.38■□□□□ 0.37
RNF2Q99496 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC17.38■□□□□ 0.37
RNF2Q99496 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RNF2Q99496 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC17.38■□□□□ 0.37
RNF2Q99496 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC17.38■□□□□ 0.37
RNF2Q99496 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RNF2Q99496 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF2Q99496 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF2Q99496 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC17.38■□□□□ 0.37
RNF2Q99496 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF2Q99496 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
RNF2Q99496 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RNF2Q99496 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC17.37■□□□□ 0.37
RNF2Q99496 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF2Q99496 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC17.37■□□□□ 0.37
RNF2Q99496 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF2Q99496 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC17.37■□□□□ 0.37
RNF2Q99496 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RNF2Q99496 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
RNF2Q99496 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
RNF2Q99496 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
RNF2Q99496 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC17.37■□□□□ 0.37
RNF2Q99496 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF2Q99496 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
RNF2Q99496 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
RNF2Q99496 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC17.37■□□□□ 0.37
RNF2Q99496 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF2Q99496 C11orf96-202ENST00000528572 1834 ntBASIC17.37■□□□□ 0.37
RNF2Q99496 AC021242.3-201ENST00000607598 1377 ntBASIC17.37■□□□□ 0.37
RNF2Q99496 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF2Q99496 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF2Q99496 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
RNF2Q99496 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RNF2Q99496 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF2Q99496 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC17.36■□□□□ 0.37
RNF2Q99496 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF2Q99496 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF2Q99496 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
RNF2Q99496 SENP5-202ENST00000419026 973 ntTSL 3 BASIC17.36■□□□□ 0.37
RNF2Q99496 KRT125P-201ENST00000546827 989 ntBASIC17.36■□□□□ 0.37
RNF2Q99496 Z92544.1-202ENST00000571933 1220 ntBASIC17.36■□□□□ 0.37
RNF2Q99496 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC17.36■□□□□ 0.37
RNF2Q99496 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF2Q99496 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF2Q99496 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF2Q99496 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF2Q99496 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC17.36■□□□□ 0.37
RNF2Q99496 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
RNF2Q99496 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF2Q99496 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
RNF2Q99496 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
RNF2Q99496 AC239859.2-201ENST00000444165 318 ntBASIC17.35■□□□□ 0.37
RNF2Q99496 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC17.35■□□□□ 0.37
RNF2Q99496 AC004448.1-201ENST00000458332 883 ntBASIC17.35■□□□□ 0.37
RNF2Q99496 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC17.35■□□□□ 0.37
RNF2Q99496 LSM7-203ENST00000585409 512 ntTSL 2 BASIC17.35■□□□□ 0.37
RNF2Q99496 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC17.35■□□□□ 0.37
RNF2Q99496 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF2Q99496 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF2Q99496 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF2Q99496 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF2Q99496 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
RNF2Q99496 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF2Q99496 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC17.35■□□□□ 0.37
RNF2Q99496 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms