Protein–RNA interactions for Protein: Q96QU1

PCDH15, Protocadherin-15, humanhuman

Predictions only

Length 1,955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15Q96QU1 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDH15Q96QU1 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDH15Q96QU1 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDH15Q96QU1 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.7■■□□□ 1.06
PCDH15Q96QU1 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.7■■□□□ 1.06
PCDH15Q96QU1 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDH15Q96QU1 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDH15Q96QU1 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDH15Q96QU1 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDH15Q96QU1 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.69■■□□□ 1.06
PCDH15Q96QU1 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.69■■□□□ 1.06
PCDH15Q96QU1 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.69■■□□□ 1.06
PCDH15Q96QU1 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PCDH15Q96QU1 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.69■■□□□ 1.06
PCDH15Q96QU1 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.68■■□□□ 1.06
PCDH15Q96QU1 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.68■■□□□ 1.06
PCDH15Q96QU1 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PCDH15Q96QU1 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.68■■□□□ 1.06
PCDH15Q96QU1 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDH15Q96QU1 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.68■■□□□ 1.06
PCDH15Q96QU1 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDH15Q96QU1 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.68■■□□□ 1.06
PCDH15Q96QU1 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDH15Q96QU1 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
PCDH15Q96QU1 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDH15Q96QU1 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDH15Q96QU1 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
PCDH15Q96QU1 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
PCDH15Q96QU1 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC21.68■■□□□ 1.06
PCDH15Q96QU1 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.68■■□□□ 1.06
PCDH15Q96QU1 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PCDH15Q96QU1 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDH15Q96QU1 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PCDH15Q96QU1 BX005040.4-201ENST00000637145 1518 ntBASIC21.68■■□□□ 1.06
PCDH15Q96QU1 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PCDH15Q96QU1 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PCDH15Q96QU1 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.67■■□□□ 1.06
PCDH15Q96QU1 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.67■■□□□ 1.06
PCDH15Q96QU1 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.67■■□□□ 1.06
PCDH15Q96QU1 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDH15Q96QU1 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDH15Q96QU1 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.67■■□□□ 1.06
PCDH15Q96QU1 LINC01529-204ENST00000636474 1715 ntBASIC21.67■■□□□ 1.06
PCDH15Q96QU1 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PCDH15Q96QU1 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC21.67■■□□□ 1.06
PCDH15Q96QU1 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.67■■□□□ 1.06
PCDH15Q96QU1 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDH15Q96QU1 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.66■■□□□ 1.06
PCDH15Q96QU1 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PCDH15Q96QU1 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PCDH15Q96QU1 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21.66■■□□□ 1.06
PCDH15Q96QU1 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
PCDH15Q96QU1 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDH15Q96QU1 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDH15Q96QU1 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PCDH15Q96QU1 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.66■■□□□ 1.06
PCDH15Q96QU1 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDH15Q96QU1 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDH15Q96QU1 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.65■■□□□ 1.06
PCDH15Q96QU1 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDH15Q96QU1 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDH15Q96QU1 ESRRAP2-201ENST00000418437 1549 ntBASIC21.65■■□□□ 1.06
PCDH15Q96QU1 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PCDH15Q96QU1 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDH15Q96QU1 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.65■■□□□ 1.06
PCDH15Q96QU1 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
PCDH15Q96QU1 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
PCDH15Q96QU1 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCDH15Q96QU1 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCDH15Q96QU1 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PCDH15Q96QU1 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.64■■□□□ 1.05
PCDH15Q96QU1 AL050303.2-201ENST00000619798 666 ntBASIC21.64■■□□□ 1.05
PCDH15Q96QU1 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCDH15Q96QU1 AC142381.3-201ENST00000568208 1670 ntBASIC21.64■■□□□ 1.05
PCDH15Q96QU1 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCDH15Q96QU1 LINC00543-201ENST00000567234 1845 ntBASIC21.64■■□□□ 1.05
PCDH15Q96QU1 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PCDH15Q96QU1 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDH15Q96QU1 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PCDH15Q96QU1 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
PCDH15Q96QU1 KRT18P11-201ENST00000435214 1283 ntBASIC21.63■■□□□ 1.05
PCDH15Q96QU1 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC21.63■■□□□ 1.05
PCDH15Q96QU1 MFSD11-216ENST00000590393 1141 ntBASIC21.63■■□□□ 1.05
PCDH15Q96QU1 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
PCDH15Q96QU1 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDH15Q96QU1 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.62■■□□□ 1.05
PCDH15Q96QU1 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDH15Q96QU1 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
PCDH15Q96QU1 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.62■■□□□ 1.05
PCDH15Q96QU1 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PCDH15Q96QU1 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC21.62■■□□□ 1.05
PCDH15Q96QU1 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDH15Q96QU1 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PCDH15Q96QU1 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
PCDH15Q96QU1 SMUG1P1-201ENST00000590640 811 ntBASIC21.61■■□□□ 1.05
PCDH15Q96QU1 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PCDH15Q96QU1 AC142086.2-201ENST00000569753 217 ntBASIC21.61■■□□□ 1.05
PCDH15Q96QU1 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.61■■□□□ 1.05
PCDH15Q96QU1 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDH15Q96QU1 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms