Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.82■■□□□ 1.08
CFAP54Q96N23 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.82■■□□□ 1.08
CFAP54Q96N23 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC21.81■■□□□ 1.08
CFAP54Q96N23 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CFAP54Q96N23 KRT18P21-201ENST00000515767 1272 ntBASIC21.81■■□□□ 1.08
CFAP54Q96N23 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
CFAP54Q96N23 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
CFAP54Q96N23 AC083880.1-201ENST00000608266 535 ntBASIC21.81■■□□□ 1.08
CFAP54Q96N23 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
CFAP54Q96N23 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
CFAP54Q96N23 AC097639.1-201ENST00000565519 1891 ntBASIC21.81■■□□□ 1.08
CFAP54Q96N23 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
CFAP54Q96N23 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC21.8■■□□□ 1.08
CFAP54Q96N23 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CFAP54Q96N23 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CFAP54Q96N23 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.8■■□□□ 1.08
CFAP54Q96N23 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CFAP54Q96N23 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CFAP54Q96N23 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.8■■□□□ 1.08
CFAP54Q96N23 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CFAP54Q96N23 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
CFAP54Q96N23 AC105036.2-201ENST00000569468 176 ntBASIC21.79■■□□□ 1.08
CFAP54Q96N23 MMD2-204ENST00000612910 778 ntTSL 5 BASIC21.79■■□□□ 1.08
CFAP54Q96N23 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC21.79■■□□□ 1.08
CFAP54Q96N23 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
CFAP54Q96N23 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.79■■□□□ 1.08
CFAP54Q96N23 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CFAP54Q96N23 UBE2DNL-204ENST00000602536 740 ntBASIC21.79■■□□□ 1.08
CFAP54Q96N23 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CFAP54Q96N23 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC21.78■■□□□ 1.08
CFAP54Q96N23 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
CFAP54Q96N23 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CFAP54Q96N23 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CFAP54Q96N23 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CFAP54Q96N23 RARRES2P4-201ENST00000514074 484 ntBASIC21.78■■□□□ 1.08
CFAP54Q96N23 RHOD-202ENST00000532559 538 ntTSL 3 BASIC21.78■■□□□ 1.08
CFAP54Q96N23 MME-217ENST00000616757 1315 ntTSL 5 BASIC21.78■■□□□ 1.08
CFAP54Q96N23 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CFAP54Q96N23 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CFAP54Q96N23 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC21.78■■□□□ 1.08
CFAP54Q96N23 ADM-205ENST00000528544 586 ntTSL 2 BASIC21.78■■□□□ 1.08
CFAP54Q96N23 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC21.78■■□□□ 1.08
CFAP54Q96N23 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CFAP54Q96N23 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.78■■□□□ 1.08
CFAP54Q96N23 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CFAP54Q96N23 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CFAP54Q96N23 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.77■■□□□ 1.08
CFAP54Q96N23 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.77■■□□□ 1.08
CFAP54Q96N23 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.77■■□□□ 1.08
CFAP54Q96N23 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.77■■□□□ 1.08
CFAP54Q96N23 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.77■■□□□ 1.08
CFAP54Q96N23 AC133552.2-202ENST00000575694 574 ntBASIC21.77■■□□□ 1.08
CFAP54Q96N23 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.77■■□□□ 1.08
CFAP54Q96N23 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.77■■□□□ 1.08
CFAP54Q96N23 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.77■■□□□ 1.08
CFAP54Q96N23 AC142086.6-201ENST00000621154 1765 ntBASIC21.77■■□□□ 1.07
CFAP54Q96N23 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.77■■□□□ 1.07
CFAP54Q96N23 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.76■■□□□ 1.07
CFAP54Q96N23 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CFAP54Q96N23 AC007322.1-201ENST00000426983 750 ntBASIC21.76■■□□□ 1.07
CFAP54Q96N23 AC142381.4-202ENST00000563973 229 ntBASIC21.76■■□□□ 1.07
CFAP54Q96N23 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.76■■□□□ 1.07
CFAP54Q96N23 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
CFAP54Q96N23 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CFAP54Q96N23 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC21.76■■□□□ 1.07
CFAP54Q96N23 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CFAP54Q96N23 BX005040.4-201ENST00000637145 1518 ntBASIC21.76■■□□□ 1.07
CFAP54Q96N23 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CFAP54Q96N23 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CFAP54Q96N23 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CFAP54Q96N23 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CFAP54Q96N23 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CFAP54Q96N23 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CFAP54Q96N23 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
CFAP54Q96N23 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CFAP54Q96N23 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CFAP54Q96N23 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CFAP54Q96N23 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
CFAP54Q96N23 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CFAP54Q96N23 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CFAP54Q96N23 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC21.75■■□□□ 1.07
CFAP54Q96N23 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
CFAP54Q96N23 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CFAP54Q96N23 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CFAP54Q96N23 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC21.75■■□□□ 1.07
CFAP54Q96N23 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.75■■□□□ 1.07
CFAP54Q96N23 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CFAP54Q96N23 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.75■■□□□ 1.07
CFAP54Q96N23 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CFAP54Q96N23 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CFAP54Q96N23 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.74■■□□□ 1.07
CFAP54Q96N23 ESRRAP1-201ENST00000400596 1257 ntBASIC21.74■■□□□ 1.07
CFAP54Q96N23 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC21.74■■□□□ 1.07
CFAP54Q96N23 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.74■■□□□ 1.07
CFAP54Q96N23 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC21.74■■□□□ 1.07
CFAP54Q96N23 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CFAP54Q96N23 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CFAP54Q96N23 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CFAP54Q96N23 AC010525.1-201ENST00000585559 441 ntBASIC21.74■■□□□ 1.07
CFAP54Q96N23 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms