Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 AC092437.1-201ENST00000624794 1048 ntBASIC17.89■□□□□ 0.45
ZNF48Q96MX3 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC17.89■□□□□ 0.45
ZNF48Q96MX3 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF48Q96MX3 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC17.89■□□□□ 0.45
ZNF48Q96MX3 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ZNF48Q96MX3 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC17.89■□□□□ 0.45
ZNF48Q96MX3 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC17.89■□□□□ 0.45
ZNF48Q96MX3 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF48Q96MX3 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC17.88■□□□□ 0.45
ZNF48Q96MX3 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF48Q96MX3 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF48Q96MX3 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF48Q96MX3 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF48Q96MX3 AC090192.1-201ENST00000517740 490 ntBASIC17.88■□□□□ 0.45
ZNF48Q96MX3 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC17.88■□□□□ 0.45
ZNF48Q96MX3 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC17.88■□□□□ 0.45
ZNF48Q96MX3 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
ZNF48Q96MX3 RARRES2P11-201ENST00000635158 484 ntBASIC17.88■□□□□ 0.45
ZNF48Q96MX3 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC17.88■□□□□ 0.45
ZNF48Q96MX3 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF48Q96MX3 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF48Q96MX3 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
ZNF48Q96MX3 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ZNF48Q96MX3 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ZNF48Q96MX3 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ZNF48Q96MX3 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ZNF48Q96MX3 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ZNF48Q96MX3 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC17.87■□□□□ 0.45
ZNF48Q96MX3 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
ZNF48Q96MX3 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ZNF48Q96MX3 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ZNF48Q96MX3 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
ZNF48Q96MX3 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ZNF48Q96MX3 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
ZNF48Q96MX3 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
ZNF48Q96MX3 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC17.87■□□□□ 0.45
ZNF48Q96MX3 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
ZNF48Q96MX3 AL137784.2-201ENST00000607332 1000 ntBASIC17.87■□□□□ 0.45
ZNF48Q96MX3 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ZNF48Q96MX3 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
ZNF48Q96MX3 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ZNF48Q96MX3 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ZNF48Q96MX3 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ZNF48Q96MX3 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
ZNF48Q96MX3 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC17.87■□□□□ 0.45
ZNF48Q96MX3 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ZNF48Q96MX3 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC17.86■□□□□ 0.45
ZNF48Q96MX3 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC17.86■□□□□ 0.45
ZNF48Q96MX3 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ZNF48Q96MX3 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC17.86■□□□□ 0.45
ZNF48Q96MX3 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC17.86■□□□□ 0.45
ZNF48Q96MX3 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ZNF48Q96MX3 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC17.86■□□□□ 0.45
ZNF48Q96MX3 LHPP-203ENST00000392757 840 ntTSL 3 BASIC17.86■□□□□ 0.45
ZNF48Q96MX3 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ZNF48Q96MX3 AP005435.1-201ENST00000529293 1178 ntBASIC17.86■□□□□ 0.45
ZNF48Q96MX3 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC17.86■□□□□ 0.45
ZNF48Q96MX3 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ZNF48Q96MX3 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ZNF48Q96MX3 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ZNF48Q96MX3 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
ZNF48Q96MX3 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
ZNF48Q96MX3 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ZNF48Q96MX3 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ZNF48Q96MX3 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ZNF48Q96MX3 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ZNF48Q96MX3 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ZNF48Q96MX3 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ZNF48Q96MX3 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC17.85■□□□□ 0.45
ZNF48Q96MX3 KRT18P14-201ENST00000534205 1250 ntBASIC17.85■□□□□ 0.45
ZNF48Q96MX3 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ZNF48Q96MX3 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ZNF48Q96MX3 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ZNF48Q96MX3 LTK-203ENST00000453182 2412 ntTSL 2 BASIC17.84■□□□□ 0.45
ZNF48Q96MX3 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
ZNF48Q96MX3 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ZNF48Q96MX3 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ZNF48Q96MX3 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ZNF48Q96MX3 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ZNF48Q96MX3 STX4-202ENST00000394998 1498 ntTSL 2 BASIC17.84■□□□□ 0.45
ZNF48Q96MX3 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ZNF48Q96MX3 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ZNF48Q96MX3 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC17.84■□□□□ 0.45
ZNF48Q96MX3 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC17.84■□□□□ 0.45
ZNF48Q96MX3 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC17.84■□□□□ 0.45
ZNF48Q96MX3 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC17.84■□□□□ 0.45
ZNF48Q96MX3 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ZNF48Q96MX3 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC17.84■□□□□ 0.45
ZNF48Q96MX3 TERF1P2-201ENST00000583350 1212 ntBASIC17.84■□□□□ 0.45
ZNF48Q96MX3 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
ZNF48Q96MX3 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
ZNF48Q96MX3 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ZNF48Q96MX3 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
ZNF48Q96MX3 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ZNF48Q96MX3 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
ZNF48Q96MX3 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
ZNF48Q96MX3 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC17.83■□□□□ 0.45
ZNF48Q96MX3 NT5C3AP1-201ENST00000394500 1012 ntBASIC17.83■□□□□ 0.44
ZNF48Q96MX3 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ZNF48Q96MX3 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms