Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.81■□□□□ 0.6
SPG11Q96JI7 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SPG11Q96JI7 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SPG11Q96JI7 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SPG11Q96JI7 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.81■□□□□ 0.6
SPG11Q96JI7 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SPG11Q96JI7 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC18.8■□□□□ 0.6
SPG11Q96JI7 PRORSD1P-201ENST00000295112 541 ntBASIC18.8■□□□□ 0.6
SPG11Q96JI7 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SPG11Q96JI7 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SPG11Q96JI7 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.8■□□□□ 0.6
SPG11Q96JI7 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.8■□□□□ 0.6
SPG11Q96JI7 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SPG11Q96JI7 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SPG11Q96JI7 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SPG11Q96JI7 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SPG11Q96JI7 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SPG11Q96JI7 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SPG11Q96JI7 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SPG11Q96JI7 SLC29A4P1-201ENST00000398760 971 ntBASIC18.8■□□□□ 0.6
SPG11Q96JI7 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
SPG11Q96JI7 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.8■□□□□ 0.6
SPG11Q96JI7 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.8■□□□□ 0.6
SPG11Q96JI7 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.8■□□□□ 0.6
SPG11Q96JI7 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SPG11Q96JI7 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SPG11Q96JI7 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
SPG11Q96JI7 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.79■□□□□ 0.6
SPG11Q96JI7 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SPG11Q96JI7 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SPG11Q96JI7 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC18.79■□□□□ 0.6
SPG11Q96JI7 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SPG11Q96JI7 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SPG11Q96JI7 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SPG11Q96JI7 CNN2P6-201ENST00000439038 900 ntBASIC18.79■□□□□ 0.6
SPG11Q96JI7 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.79■□□□□ 0.6
SPG11Q96JI7 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SPG11Q96JI7 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SPG11Q96JI7 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC18.78■□□□□ 0.6
SPG11Q96JI7 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SPG11Q96JI7 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SPG11Q96JI7 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SPG11Q96JI7 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SPG11Q96JI7 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
SPG11Q96JI7 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.78■□□□□ 0.6
SPG11Q96JI7 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SPG11Q96JI7 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SPG11Q96JI7 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC18.78■□□□□ 0.6
SPG11Q96JI7 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SPG11Q96JI7 AC144652.1-201ENST00000609974 1624 ntBASIC18.77■□□□□ 0.6
SPG11Q96JI7 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC18.77■□□□□ 0.6
SPG11Q96JI7 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
SPG11Q96JI7 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SPG11Q96JI7 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.77■□□□□ 0.6
SPG11Q96JI7 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.77■□□□□ 0.6
SPG11Q96JI7 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
SPG11Q96JI7 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SPG11Q96JI7 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.77■□□□□ 0.6
SPG11Q96JI7 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
SPG11Q96JI7 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SPG11Q96JI7 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SPG11Q96JI7 SLC7A5P2-201ENST00000553010 536 ntBASIC18.76■□□□□ 0.59
SPG11Q96JI7 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
SPG11Q96JI7 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SPG11Q96JI7 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SPG11Q96JI7 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SPG11Q96JI7 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
SPG11Q96JI7 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SPG11Q96JI7 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SPG11Q96JI7 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.76■□□□□ 0.59
SPG11Q96JI7 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SPG11Q96JI7 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SPG11Q96JI7 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SPG11Q96JI7 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.76■□□□□ 0.59
SPG11Q96JI7 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SPG11Q96JI7 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC18.76■□□□□ 0.59
SPG11Q96JI7 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
SPG11Q96JI7 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SPG11Q96JI7 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
SPG11Q96JI7 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.75■□□□□ 0.59
SPG11Q96JI7 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SPG11Q96JI7 AC098934.4-201ENST00000564127 592 ntBASIC18.75■□□□□ 0.59
SPG11Q96JI7 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SPG11Q96JI7 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SPG11Q96JI7 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SPG11Q96JI7 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SPG11Q96JI7 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SPG11Q96JI7 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SPG11Q96JI7 TSPY6P-201ENST00000448518 926 ntBASIC18.74■□□□□ 0.59
SPG11Q96JI7 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.74■□□□□ 0.59
SPG11Q96JI7 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SPG11Q96JI7 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SPG11Q96JI7 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.74■□□□□ 0.59
SPG11Q96JI7 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SPG11Q96JI7 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SPG11Q96JI7 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SPG11Q96JI7 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
SPG11Q96JI7 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.73■□□□□ 0.59
SPG11Q96JI7 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.73■□□□□ 0.59
SPG11Q96JI7 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms