Protein–RNA interactions for Protein: Q96EE3

SEH1L, Nucleoporin SEH1, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1LQ96EE3 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
SEH1LQ96EE3 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SEH1LQ96EE3 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SEH1LQ96EE3 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.07■□□□□ 0.64
SEH1LQ96EE3 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SEH1LQ96EE3 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.07■□□□□ 0.64
SEH1LQ96EE3 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
SEH1LQ96EE3 AC139530.1-201ENST00000575312 1977 ntBASIC19.07■□□□□ 0.64
SEH1LQ96EE3 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SEH1LQ96EE3 KRT16P3-201ENST00000439127 1283 ntBASIC19.07■□□□□ 0.64
SEH1LQ96EE3 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.07■□□□□ 0.64
SEH1LQ96EE3 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
SEH1LQ96EE3 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SEH1LQ96EE3 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
SEH1LQ96EE3 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SEH1LQ96EE3 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.07■□□□□ 0.64
SEH1LQ96EE3 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SEH1LQ96EE3 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.07■□□□□ 0.64
SEH1LQ96EE3 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SEH1LQ96EE3 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SEH1LQ96EE3 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SEH1LQ96EE3 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
SEH1LQ96EE3 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
SEH1LQ96EE3 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SEH1LQ96EE3 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.06■□□□□ 0.64
SEH1LQ96EE3 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.06■□□□□ 0.64
SEH1LQ96EE3 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.06■□□□□ 0.64
SEH1LQ96EE3 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.06■□□□□ 0.64
SEH1LQ96EE3 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.06■□□□□ 0.64
SEH1LQ96EE3 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.06■□□□□ 0.64
SEH1LQ96EE3 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.06■□□□□ 0.64
SEH1LQ96EE3 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SEH1LQ96EE3 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
SEH1LQ96EE3 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SEH1LQ96EE3 C11orf96-202ENST00000528572 1834 ntBASIC19.06■□□□□ 0.64
SEH1LQ96EE3 AC092053.2-201ENST00000640557 1818 ntBASIC19.06■□□□□ 0.64
SEH1LQ96EE3 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SEH1LQ96EE3 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SEH1LQ96EE3 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.05■□□□□ 0.64
SEH1LQ96EE3 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SEH1LQ96EE3 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SEH1LQ96EE3 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SEH1LQ96EE3 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.05■□□□□ 0.64
SEH1LQ96EE3 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SEH1LQ96EE3 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SEH1LQ96EE3 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
SEH1LQ96EE3 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
SEH1LQ96EE3 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
SEH1LQ96EE3 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SEH1LQ96EE3 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.04■□□□□ 0.64
SEH1LQ96EE3 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SEH1LQ96EE3 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
SEH1LQ96EE3 AC005703.6-201ENST00000623265 1329 ntBASIC19.04■□□□□ 0.64
SEH1LQ96EE3 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SEH1LQ96EE3 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SEH1LQ96EE3 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.04■□□□□ 0.64
SEH1LQ96EE3 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
SEH1LQ96EE3 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
SEH1LQ96EE3 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SEH1LQ96EE3 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SEH1LQ96EE3 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SEH1LQ96EE3 AC079630.1-202ENST00000618127 1840 ntBASIC19.04■□□□□ 0.64
SEH1LQ96EE3 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SEH1LQ96EE3 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SEH1LQ96EE3 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.04■□□□□ 0.64
SEH1LQ96EE3 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SEH1LQ96EE3 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
SEH1LQ96EE3 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SEH1LQ96EE3 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
SEH1LQ96EE3 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.03■□□□□ 0.64
SEH1LQ96EE3 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.03■□□□□ 0.64
SEH1LQ96EE3 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
SEH1LQ96EE3 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SEH1LQ96EE3 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.03■□□□□ 0.64
SEH1LQ96EE3 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SEH1LQ96EE3 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
SEH1LQ96EE3 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.02■□□□□ 0.64
SEH1LQ96EE3 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SEH1LQ96EE3 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SEH1LQ96EE3 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SEH1LQ96EE3 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SEH1LQ96EE3 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SEH1LQ96EE3 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
SEH1LQ96EE3 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
SEH1LQ96EE3 AL356441.2-201ENST00000443009 864 ntBASIC19.02■□□□□ 0.64
SEH1LQ96EE3 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.02■□□□□ 0.64
SEH1LQ96EE3 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.02■□□□□ 0.64
SEH1LQ96EE3 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
SEH1LQ96EE3 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SEH1LQ96EE3 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
SEH1LQ96EE3 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.02■□□□□ 0.63
SEH1LQ96EE3 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.01■□□□□ 0.63
SEH1LQ96EE3 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SEH1LQ96EE3 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
SEH1LQ96EE3 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
SEH1LQ96EE3 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SEH1LQ96EE3 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SEH1LQ96EE3 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SEH1LQ96EE3 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SEH1LQ96EE3 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms