Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
TMEM54Q969K7 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM54Q969K7 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM54Q969K7 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.42■□□□□ 0.7
TMEM54Q969K7 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.42■□□□□ 0.7
TMEM54Q969K7 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.42■□□□□ 0.7
TMEM54Q969K7 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
TMEM54Q969K7 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
TMEM54Q969K7 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TMEM54Q969K7 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TMEM54Q969K7 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
TMEM54Q969K7 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.41■□□□□ 0.7
TMEM54Q969K7 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
TMEM54Q969K7 UNC93B3-201ENST00000308076 687 ntBASIC19.41■□□□□ 0.7
TMEM54Q969K7 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.41■□□□□ 0.7
TMEM54Q969K7 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
TMEM54Q969K7 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.41■□□□□ 0.7
TMEM54Q969K7 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TMEM54Q969K7 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TMEM54Q969K7 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TMEM54Q969K7 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
TMEM54Q969K7 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.41■□□□□ 0.7
TMEM54Q969K7 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.41■□□□□ 0.7
TMEM54Q969K7 AL031602.1-201ENST00000633169 911 ntBASIC19.41■□□□□ 0.7
TMEM54Q969K7 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
TMEM54Q969K7 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TMEM54Q969K7 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TMEM54Q969K7 GUSBP5-202ENST00000510805 1989 ntBASIC19.41■□□□□ 0.7
TMEM54Q969K7 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
TMEM54Q969K7 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
TMEM54Q969K7 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TMEM54Q969K7 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TMEM54Q969K7 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TMEM54Q969K7 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TMEM54Q969K7 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
TMEM54Q969K7 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TMEM54Q969K7 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.4■□□□□ 0.7
TMEM54Q969K7 AL117328.2-201ENST00000624617 1940 ntBASIC19.4■□□□□ 0.7
TMEM54Q969K7 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
TMEM54Q969K7 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
TMEM54Q969K7 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TMEM54Q969K7 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TMEM54Q969K7 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TMEM54Q969K7 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC19.39■□□□□ 0.7
TMEM54Q969K7 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
TMEM54Q969K7 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.39■□□□□ 0.7
TMEM54Q969K7 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TMEM54Q969K7 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TMEM54Q969K7 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TMEM54Q969K7 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
TMEM54Q969K7 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TMEM54Q969K7 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TMEM54Q969K7 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TMEM54Q969K7 CA15P2-201ENST00000611168 834 ntBASIC19.39■□□□□ 0.69
TMEM54Q969K7 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
TMEM54Q969K7 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TMEM54Q969K7 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.39■□□□□ 0.69
TMEM54Q969K7 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TMEM54Q969K7 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
TMEM54Q969K7 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TMEM54Q969K7 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TMEM54Q969K7 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TMEM54Q969K7 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TMEM54Q969K7 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.38■□□□□ 0.69
TMEM54Q969K7 AC010525.1-201ENST00000585559 441 ntBASIC19.38■□□□□ 0.69
TMEM54Q969K7 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TMEM54Q969K7 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TMEM54Q969K7 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TMEM54Q969K7 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TMEM54Q969K7 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TMEM54Q969K7 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TMEM54Q969K7 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TMEM54Q969K7 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
TMEM54Q969K7 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.37■□□□□ 0.69
TMEM54Q969K7 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.37■□□□□ 0.69
TMEM54Q969K7 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TMEM54Q969K7 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.37■□□□□ 0.69
TMEM54Q969K7 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TMEM54Q969K7 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TMEM54Q969K7 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TMEM54Q969K7 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TMEM54Q969K7 ECEL1P1-201ENST00000373592 1742 ntBASIC19.37■□□□□ 0.69
TMEM54Q969K7 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TMEM54Q969K7 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.36■□□□□ 0.69
TMEM54Q969K7 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.36■□□□□ 0.69
TMEM54Q969K7 AL136162.1-201ENST00000607711 1078 ntBASIC19.36■□□□□ 0.69
TMEM54Q969K7 AC242852.2-201ENST00000615738 1807 ntBASIC19.36■□□□□ 0.69
TMEM54Q969K7 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TMEM54Q969K7 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.35■□□□□ 0.69
TMEM54Q969K7 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
TMEM54Q969K7 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TMEM54Q969K7 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.35■□□□□ 0.69
TMEM54Q969K7 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.35■□□□□ 0.69
TMEM54Q969K7 AC024257.2-201ENST00000549699 147 ntBASIC19.35■□□□□ 0.69
TMEM54Q969K7 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TMEM54Q969K7 AC068587.7-201ENST00000641602 218 ntBASIC19.35■□□□□ 0.69
TMEM54Q969K7 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.35■□□□□ 0.69
TMEM54Q969K7 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TMEM54Q969K7 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
TMEM54Q969K7 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms